Coexpression

TKU uniform-model v4 TPM and independent OH-1004 datasets are connected. Pearson candidates are computed within each study on log2(TPM+1), without pooling studies. Two-sample studies are excluded; legacy TK1151 caches remain quarantined.

TkA01G624900 LXL04_000258

Evidence boundary: the all-dataset view does not merge different projects or reference versions into one artificial matrix. Pearson correlations on log2(value+1) are computed within each RNA-seq dataset and then summarized. Results indicate expression similarity only, not regulation, interaction, or causality.

Data Summary

Available matrices

Current scope

All datasets

Datasets with query

Candidate rows

2200

PRJNA539838_OH1004_RNAseq_TPM · 200 PRJNA1262623_OH1004_RNAseq_TPM · 200 PRJNA1490093_OH1004_RNAseq_TPM · 200 PRJNA827459_OH1004_RNAseq_TPM · 200 PRJDB36270_OH1004_RNAseq_TPM · 200 PRJNA745038_OH1004_RNAseq_TPM · 200 PRJNA931633_OH1004_RNAseq_TPM · 200 PRJNA918839_OH1004_RNAseq_TPM · 200 DRA_unassigned_DRR_OH1004_RNAseq_TPM · 200 PRJNA413689_OH1004_RNAseq_TPM · 200 PRJNA745038_MeJA_laticifer_RNAseq · 200

This page summarizes only the coexpression results in the available catalog. Studies are computed separately without mixing samples across datasets. Correlations from only 3 samples are especially unstable and should not be treated as high-confidence regulatory evidence. TKU uses per-gene, per-study top-200 query caches; this is neither an all-pairs network nor experimental regulatory evidence.

Query Gene and Representative Expression Vector

Input ID

TkA05G095790

Source ID

TkA05G095790

TK1151

TkA05G095790

OH-1004

LXL04_026396

Representative matrix ID

LXL04_026396

Representative vector SD

16 / 0.355

R12M2_1
SRR9095317

27.050

R12M3_2
SRR9095316

27.877

R12M3_1
SRR9095315

28.074

R18M1_1
SRR9095314

52.816

R18M2_1
SRR9095313

47.097

R18M3_1
SRR9095312

49.253

R3M2_1
SRR9095311

43.852

R1M2_1
SRR9095310

31.297

R1M1_1
SRR9095309

29.232

R3M1_1
SRR9095308

43.270

R1M3_1
SRR9095307

31.331

R12M1_1
SRR9095306

23.074

R3M3_1
SRR9095305

43.297

R6M1_1
SRR9095304

37.956

R6M2_1
SRR9095303

36.722

R6M3_1
SRR9095302

44.530

Candidate Coexpression Partner Summary

LXL04_000074
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_000222
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_000313
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_000422
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_000456
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_000652
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_000917
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001019
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001213
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001303
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001472
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001831
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001944
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001946
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_001992
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_002088
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_002106
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

LXL04_002231
PRJNA413689_OH1004_RNAseq_TPM

r=1.000

Reference genes only. Each dataset retains the top 200 partners by absolute correlation. Threshold filtering applies to those candidates, not every qualifying genome-wide partner. Downloads include all filtered cached candidates across all pages.

Download All Filtered Candidates

Showing 1–50 / 2200 · Page 1/44 Next

Dataset	Reference	Matrix ID	Partner	r	\|r\|	Direction	Rank	Samples	Method
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000074`	1.0000	1.0000	positive	1	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000222`	1.0000	1.0000	positive	2	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000313`	1.0000	1.0000	positive	3	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000422`	1.0000	1.0000	positive	4	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000456`	1.0000	1.0000	positive	5	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000652`	1.0000	1.0000	positive	6	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_000917`	1.0000	1.0000	positive	7	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001019`	1.0000	1.0000	positive	8	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001213`	1.0000	1.0000	positive	9	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001303`	1.0000	1.0000	positive	10	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001472`	1.0000	1.0000	positive	11	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001831`	1.0000	1.0000	positive	12	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001944`	1.0000	1.0000	positive	13	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001946`	1.0000	1.0000	positive	14	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_001992`	1.0000	1.0000	positive	15	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002088`	1.0000	1.0000	positive	16	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002106`	1.0000	1.0000	positive	17	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002231`	1.0000	1.0000	positive	18	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002265`	1.0000	1.0000	positive	19	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002281`	1.0000	1.0000	positive	20	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002355`	1.0000	1.0000	positive	21	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002359`	1.0000	1.0000	positive	22	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002410`	1.0000	1.0000	positive	23	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002582`	1.0000	1.0000	positive	24	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002653`	1.0000	1.0000	positive	25	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002726`	1.0000	1.0000	positive	26	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002771`	1.0000	1.0000	positive	27	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_002830`	1.0000	1.0000	positive	28	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_003012`	1.0000	1.0000	positive	29	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_003094`	1.0000	1.0000	positive	30	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_004083`	1.0000	1.0000	positive	31	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_004283`	1.0000	1.0000	positive	32	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_004807`	1.0000	1.0000	positive	33	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_004870`	1.0000	1.0000	positive	34	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_004887`	1.0000	1.0000	positive	35	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_004943`	1.0000	1.0000	positive	36	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_005110`	1.0000	1.0000	positive	37	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_005677`	1.0000	1.0000	positive	38	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_006042`	1.0000	1.0000	positive	39	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_006383`	1.0000	1.0000	positive	40	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_006874`	1.0000	1.0000	positive	41	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007122`	1.0000	1.0000	positive	42	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007478`	1.0000	1.0000	positive	43	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007493`	1.0000	1.0000	positive	44	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007572`	1.0000	1.0000	positive	45	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007586`	1.0000	1.0000	positive	46	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007621`	1.0000	1.0000	positive	47	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007678`	1.0000	1.0000	positive	48	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007694`	1.0000	1.0000	positive	49	3	Pearson r on log2(value+1); reference genes only
`PRJNA413689_OH1004_RNAseq_TPM`	OH-1004	`LXL04_026396`	`LXL04_007882`	1.0000	1.0000	positive	50	3	Pearson r on log2(value+1); reference genes only

Browse by Dataset

`PRJNA539838_OH1004_RNAseq_TPM`

OH-1004 · 16 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_018869`	0.9911	0.9911	1	16
`LXL04_032421`	0.9894	0.9894	2	16
`LXL04_023296`	0.9832	0.9832	3	16
`LXL04_018982`	0.9824	0.9824	4	16
`LXL04_037940`	0.9810	0.9810	5	16
`LXL04_015976`	0.9804	0.9804	6	16
`LXL04_013822`	0.9799	0.9799	7	16
`LXL04_014552`	0.9789	0.9789	8	16
`LXL04_008275`	-0.9774	0.9774	9	16
`LXL04_009509`	0.9772	0.9772	10	16

`PRJNA1262623_OH1004_RNAseq_TPM`

OH-1004 · 15 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_010929`	0.9909	0.9909	1	15
`LXL04_020560`	0.9901	0.9901	2	15
`LXL04_033616`	0.9883	0.9883	3	15
`LXL04_022805`	0.9877	0.9877	4	15
`LXL04_029285`	0.9872	0.9872	5	15
`LXL04_036398`	0.9864	0.9864	6	15
`LXL04_018874`	0.9863	0.9863	7	15
`LXL04_026973`	0.9847	0.9847	8	15
`LXL04_012807`	0.9840	0.9840	9	15
`LXL04_010644`	0.9837	0.9837	10	15

`PRJNA1490093_OH1004_RNAseq_TPM`

OH-1004 · 15 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_000258`	0.9532	0.9532	1	15
`LXL04_007516`	0.9499	0.9499	2	15
`LXL04_030900`	0.9420	0.9420	3	15
`LXL04_033292`	0.9395	0.9395	4	15
`LXL04_028181`	0.9388	0.9388	5	15
`LXL04_019037`	0.9386	0.9386	6	15
`LXL04_008322`	0.9351	0.9351	7	15
`LXL04_027233`	0.9344	0.9344	8	15
`LXL04_018803`	0.9334	0.9334	9	15
`LXL04_030076`	0.9325	0.9325	10	15

`PRJNA827459_OH1004_RNAseq_TPM`

OH-1004 · 15 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_029226`	0.9494	0.9494	1	15
`LXL04_027212`	0.9405	0.9405	2	15
`LXL04_012583`	0.9400	0.9400	3	15
`LXL04_034943`	0.9296	0.9296	4	15
`LXL04_026211`	0.9260	0.9260	5	15
`LXL04_039180`	-0.9257	0.9257	6	15
`LXL04_002480`	-0.9253	0.9253	7	15
`LXL04_006055`	0.9238	0.9238	8	15
`LXL04_013338`	0.9231	0.9231	9	15
`LXL04_023820`	-0.9227	0.9227	10	15

`PRJDB36270_OH1004_RNAseq_TPM`

OH-1004 · 9 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_019001`	0.9858	0.9858	1	9
`LXL04_025166`	0.9829	0.9829	2	9
`LXL04_021797`	0.9808	0.9808	3	9
`LXL04_018991`	0.9782	0.9782	4	9
`LXL04_027257`	0.9779	0.9779	5	9
`LXL04_014773`	0.9773	0.9773	6	9
`LXL04_035102`	0.9754	0.9754	7	9
`LXL04_024662`	0.9713	0.9713	8	9
`LXL04_026359`	0.9707	0.9707	9	9
`LXL04_026954`	0.9707	0.9707	10	9

`PRJNA745038_OH1004_RNAseq_TPM`

OH-1004 · 9 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_023874`	-0.9964	0.9964	1	9
`LXL04_014794`	0.9948	0.9948	2	9
`LXL04_011905`	0.9943	0.9943	3	9
`LXL04_035724`	0.9942	0.9942	4	9
`LXL04_032293`	0.9940	0.9940	5	9
`LXL04_032314`	0.9939	0.9939	6	9
`LXL04_007550`	0.9934	0.9934	7	9
`LXL04_037108`	0.9929	0.9929	8	9
`LXL04_030115`	0.9926	0.9926	9	9
`LXL04_017515`	0.9925	0.9925	10	9

`PRJNA931633_OH1004_RNAseq_TPM`

OH-1004 · 9 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_013344`	0.9984	0.9984	1	9
`LXL04_004854`	-0.9982	0.9982	2	9
`LXL04_032383`	0.9978	0.9978	3	9
`LXL04_030510`	0.9975	0.9975	4	9
`LXL04_031890`	0.9971	0.9971	5	9
`LXL04_027068`	0.9966	0.9966	6	9
`LXL04_029134`	0.9966	0.9966	7	9
`LXL04_030682`	0.9965	0.9965	8	9
`LXL04_036173`	0.9965	0.9965	9	9
`LXL04_037506`	0.9962	0.9962	10	9

`PRJNA918839_OH1004_RNAseq_TPM`

OH-1004 · 6 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_006227`	-0.9963	0.9963	1	6
`LXL04_031192`	0.9957	0.9957	2	6
`LXL04_021738`	0.9953	0.9953	3	6
`LXL04_002362`	-0.9943	0.9943	4	6
`LXL04_026539`	0.9937	0.9937	5	6
`LXL04_034285`	0.9935	0.9935	6	6
`LXL04_026171`	0.9920	0.9920	7	6
`LXL04_020122`	-0.9891	0.9891	8	6
`LXL04_033874`	-0.9888	0.9888	9	6
`LXL04_002798`	0.9887	0.9887	10	6

`DRA_unassigned_DRR_OH1004_RNAseq_TPM`

OH-1004 · 4 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_011128`	1.0000	1.0000	1	4
`LXL04_009232`	1.0000	1.0000	2	4
`LXL04_013610`	1.0000	1.0000	3	4
`LXL04_018919`	-1.0000	1.0000	4	4
`LXL04_013276`	1.0000	1.0000	5	4
`LXL04_017947`	0.9999	0.9999	6	4
`LXL04_009434`	0.9999	0.9999	7	4
`LXL04_017075`	0.9999	0.9999	8	4
`LXL04_027868`	0.9999	0.9999	9	4
`LXL04_011102`	0.9999	0.9999	10	4

`PRJNA413689_OH1004_RNAseq_TPM`

OH-1004 · 3 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_000074`	1.0000	1.0000	1	3
`LXL04_000222`	1.0000	1.0000	2	3
`LXL04_000313`	1.0000	1.0000	3	3
`LXL04_000422`	1.0000	1.0000	4	3
`LXL04_000456`	1.0000	1.0000	5	3
`LXL04_000652`	1.0000	1.0000	6	3
`LXL04_000917`	1.0000	1.0000	7	3
`LXL04_001019`	1.0000	1.0000	8	3
`LXL04_001213`	1.0000	1.0000	9	3
`LXL04_001303`	1.0000	1.0000	10	3

`PRJNA745038_MeJA_laticifer_RNAseq`

OH-1004 · 9 samples · matrix ID LXL04_026396 · hits 200 · Preview of the first 10; use pagination or download above for all candidates.

Partner	r	\|r\|	Rank	Samples
`LXL04_008787`	0.9956	0.9956	1	9
`LXL04_035724`	0.9942	0.9942	2	9
`LXL04_011905`	0.9942	0.9942	3	9
`LXL04_014794`	0.9941	0.9941	4	9
`LXL04_032314`	0.9939	0.9939	5	9
`LXL04_032293`	0.9933	0.9933	6	9
`LXL04_004202`	0.9933	0.9933	7	9
`LXL04_007550`	0.9932	0.9932	8	9
`LXL04_017515`	0.9932	0.9932	9	9
`LXL04_028256`	0.9932	0.9932	10	9