Coexpression

TKU uniform-model v4 TPM and independent OH-1004 datasets are connected. Pearson candidates are computed within each study on log2(TPM+1), without pooling studies. Two-sample studies are excluded; legacy TK1151 caches remain quarantined.

TkA01G624900 LXL04_000258

Evidence boundary: the all-dataset view does not merge different projects or reference versions into one artificial matrix. Pearson correlations on log2(value+1) are computed within each RNA-seq dataset and then summarized. Results indicate expression similarity only, not regulation, interaction, or causality.

Data Summary

Available matrices

Current scope

PRJNA745038_MeJA_laticifer_RNAseq

Datasets with query

Candidate rows

200

This page summarizes only the coexpression results in the available catalog. Studies are computed separately without mixing samples across datasets. Correlations from only 3 samples are especially unstable and should not be treated as high-confidence regulatory evidence. TKU uses per-gene, per-study top-200 query caches; this is neither an all-pairs network nor experimental regulatory evidence.

Query Gene and Representative Expression Vector

Input ID

LXL04_000258

Source ID

LXL04_000258

TK1151

-

OH-1004

LXL04_000258

Representative matrix ID

LXL04_000258

Representative vector SD

9 / 0.531

0h MeJA laticifer rep1
SRR15094077

630.000

0h MeJA laticifer rep2
SRR15094076

511.000

0h MeJA laticifer rep3
SRR15094075

495.000

6h MeJA laticifer rep1
SRR15094074

889.000

6h MeJA laticifer rep2
SRR15094073

1166.000

6h MeJA laticifer rep3
SRR15094072

1387.000

24h MeJA laticifer rep1
SRR15094071

810.000

24h MeJA laticifer rep2
SRR15094070

1179.000

24h MeJA laticifer rep3
SRR15094069

872.000

Candidate Coexpression Partner Summary

LXL04_017793
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.996

LXL04_000282
PRJNA745038_MeJA_laticifer_RNAseq

r=0.990

LXL04_030528
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.990

LXL04_006853
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.988

LXL04_007050
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.985

LXL04_028590
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.985

LXL04_000814
PRJNA745038_MeJA_laticifer_RNAseq

r=0.985

LXL04_033516
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.985

LXL04_013368
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.984

LXL04_005174
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.983

LXL04_014676
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.983

LXL04_019660
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.982

LXL04_033963
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.982

LXL04_018722
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.981

LXL04_036545
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.981

LXL04_036959
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.980

LXL04_012811
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.980

LXL04_019823
PRJNA745038_MeJA_laticifer_RNAseq

r=-0.980

Reference genes only. Each dataset retains the top 200 partners by absolute correlation. Threshold filtering applies to those candidates, not every qualifying genome-wide partner. Downloads include all filtered cached candidates across all pages.

Download All Filtered Candidates

Showing 1–50 / 200 · Page 1/4 Next

Dataset	Reference	Matrix ID	Partner	r	\|r\|	Direction	Rank	Samples	Method
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_017793`	-0.9957	0.9957	negative	1	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_000282`	0.9902	0.9902	positive	2	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_030528`	-0.9901	0.9901	negative	3	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_006853`	-0.9881	0.9881	negative	4	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_007050`	-0.9854	0.9854	negative	5	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_028590`	-0.9852	0.9852	negative	6	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_000814`	0.9849	0.9849	positive	7	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_033516`	-0.9846	0.9846	negative	8	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_013368`	-0.9843	0.9843	negative	9	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_005174`	-0.9833	0.9833	negative	10	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_014676`	-0.9826	0.9826	negative	11	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_019660`	-0.9817	0.9817	negative	12	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_033963`	-0.9816	0.9816	negative	13	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_018722`	-0.9813	0.9813	negative	14	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_036545`	-0.9810	0.9810	negative	15	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_036959`	-0.9804	0.9804	negative	16	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_012811`	-0.9801	0.9801	negative	17	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_019823`	-0.9800	0.9800	negative	18	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_009257`	0.9798	0.9798	positive	19	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_003680`	-0.9798	0.9798	negative	20	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_037646`	-0.9795	0.9795	negative	21	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_026454`	-0.9789	0.9789	negative	22	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_017684`	-0.9788	0.9788	negative	23	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_037185`	-0.9785	0.9785	negative	24	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_036205`	-0.9782	0.9782	negative	25	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_029701`	0.9780	0.9780	positive	26	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_021786`	-0.9776	0.9776	negative	27	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_037009`	-0.9776	0.9776	negative	28	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_021575`	-0.9771	0.9771	negative	29	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_024994`	-0.9765	0.9765	negative	30	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_002771`	-0.9756	0.9756	negative	31	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_014041`	-0.9754	0.9754	negative	32	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_026762`	-0.9754	0.9754	negative	33	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_018782`	-0.9753	0.9753	negative	34	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_018831`	-0.9752	0.9752	negative	35	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_011524`	-0.9752	0.9752	negative	36	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_013187`	-0.9746	0.9746	negative	37	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_018844`	-0.9745	0.9745	negative	38	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_038842`	-0.9742	0.9742	negative	39	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_021633`	-0.9739	0.9739	negative	40	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_003245`	-0.9737	0.9737	negative	41	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_017722`	-0.9736	0.9736	negative	42	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_022018`	-0.9735	0.9735	negative	43	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_037103`	-0.9734	0.9734	negative	44	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_013435`	-0.9732	0.9732	negative	45	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_008961`	-0.9732	0.9732	negative	46	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_037180`	-0.9730	0.9730	negative	47	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_038717`	-0.9729	0.9729	negative	48	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_024738`	0.9724	0.9724	positive	49	9	Pearson r on log2(value+1); reference genes only
`PRJNA745038_MeJA_laticifer_RNAseq`	OH-1004	`LXL04_000258`	`LXL04_004234`	-0.9716	0.9716	negative	50	9	Pearson r on log2(value+1); reference genes only