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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkAUNG094030
Query referenceTK1151
LocationChrUn:26586554-26590039 (+)
DescriptionSimilar to RH29: Putative DEAD-box ATP-dependent RNA helicase 29 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032295 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g19210 DEAD-box ATP-dependent RNA helicase 58, chloroplastic. No verified direct reference in this release
At1g12770 Essential protein required during embryogenesis.
Identification of a developmental transition in plasmodesmatal function during embryogenesis in Arabidopsis thaliana.2002 · DOI: 10.1242/dev.129.5.1261
Loss of the plant DEAD-box protein ISE1 leads to defective mitochondria and increased cell-to-cell transport via plasmodesmata.2009 · DOI: 10.1073/pnas.0909229106
Loss of INCREASED SIZE EXCLUSION LIMIT (ISE)1 or ISE2 increases the formation of secondary plasmodesmata.2010 · DOI: 10.1016/j.cub.2010.03.064

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0970600 DEAD-box ATP-dependent RNA helicase 58, chloroplastic. No verified direct reference in this release
Os02g0636300 DEAD-box ATP-dependent RNA helicase 47A. No verified direct reference in this release
Os03g0219700 DEAD-box ATP-dependent RNA helicase 47B. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006364rRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006396RNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016070RNA metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030520estrogen receptor signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.683; coverage=61.064; evalue=6.78e-169; UniProt GO evidence=TAS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.276; coverage=94.559; evalue=0.0; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.683; coverage=61.064; evalue=6.78e-169; UniProt GO evidence=HDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003714transcription corepressor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.276; coverage=94.559; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003724RNA helicase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005102signaling receptor bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030331nuclear estrogen receptor bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G77030KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.14; coverage=92.987; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os08g0416100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=62.02; coverage=94.559; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:79039KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.683; coverage=61.064; evalue=6.78e-169UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:71990KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.065; coverage=93.712; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release