Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA08G136840 |
|---|---|
| Query reference | TK1151 |
| Location | Chr08:35543454-35545070 (-) |
| Description | Similar to HAL3B: Probable phosphopantothenoylcysteine decarboxylase (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_031921 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g48605 |
Involved in plant growth and salt and osmotic tolerance. | No verified direct reference in this release |
At3g18030 |
Involved in plant growth, and salt and osmotic tolerance. |
Arabidopsis thaliana AtHAL3: a flavoprotein related to salt and osmotic tolerance and plant growth.1999 · DOI: 10.1046/j.1365-313x.1999.00626.x Arabidopsis thaliana flavoprotein AtHAL3a catalyzes the decarboxylation of 4'-Phosphopantothenoylcysteine to 4'-phosphopantetheine, a key step in coenzyme A biosynthesis.2001 · DOI: 10.1074/jbc.m100776200
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.103; coverage=91.943; evalue=3.3e-99; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010226 | response to lithium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015937 | coenzyme A biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042538 | hyperosmotic salinity response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.579; coverage=90.047; evalue=3.77e-98; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048573 | photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072708 | response to sorbitol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901002 | positive regulation of response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902074 | response to salt | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.103; coverage=91.943; evalue=3.3e-99; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.103; coverage=91.943; evalue=3.3e-99; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071513 | phosphopantothenoylcysteine decarboxylase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004633 | phosphopantothenoylcysteine decarboxylase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010181 | FMN binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G48605 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=71.579; coverage=90.047; evalue=3.77e-98 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G18030 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.005; coverage=93.365; evalue=1.42e-97 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gmx:100499989 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=71.875; coverage=90.995; evalue=7.58e-100 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gmx:100778368 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.354; coverage=90.995; evalue=8.38e-99 | UniProtKB/Swiss-Prot DAT 2026 current_release |