Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA08G116440 |
|---|---|
| Query reference | TK1151 |
| Location | Chr08:30345654-30346282 (-) |
| Description | Similar to EXPA4: Expansin-A4 (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_031599 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 13 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g69530 |
Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. | No verified direct reference in this release |
At2g03090 |
Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: A2Y5R6 |
Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. | No verified direct reference in this release |
Os05g0477600 |
Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. | |
Os01g0823100 |
May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006949 | syncytium formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009826 | unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=NAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009828 | plant-type cell wall loosening | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.409; coverage=80.0; evalue=2.17e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009831 | plant-type cell wall modification involved in multidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010119 | regulation of stomatal movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071669 | plant-type cell wall organization or biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.409; coverage=80.0; evalue=2.17e-43; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.409; coverage=80.0; evalue=2.17e-43; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.409; coverage=80.0; evalue=2.17e-43; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005199 | structural constituent of cell wall | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.744; coverage=78.182; evalue=9.49e-42; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G26770 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.744; coverage=78.182; evalue=9.49e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G69530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.108; coverage=75.455; evalue=7.68e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0823100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=76.744; coverage=78.182; evalue=8.18e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0477600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.409; coverage=80.0; evalue=2.17e-43 | UniProtKB/Swiss-Prot DAT 2026 current_release |