基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA08G113000 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr08:29439080-29441168 (+) |
| 描述 | Similar to rsmI: Ribosomal RNA small subunit methyltransferase I (Synechocystis sp. (strain PCC 6803 / Kazusa) OX%3D1111708) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_031547 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 6 条 GO 注释和 8 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006364 | rRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67; UniProt GO evidence=IMP:EcoCyc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019354 | siroheme biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.148; 覆盖度=73.973; E 值=1.71e-82; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.148; 覆盖度=73.973; E 值=1.71e-82; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004851 | uroporphyrin-III C-methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.148; 覆盖度=73.973; E 值=1.71e-82; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67; UniProt GO evidence=IDA:EcoCyc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070677 | rRNA (cytosine-2'-O-)-methyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.148; 覆盖度=73.973; E 值=1.71e-82; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | bha:BH0049 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=43.509; 覆盖度=78.082; E 值=7.38e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ece:Z4505 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ecj:JW3115 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | eco:b3146 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ecoc:C3026_17140 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ecs:ECs_4027 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=46.352; 覆盖度=63.836; E 值=6.39e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | syn:sll0818 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.148; 覆盖度=73.973; E 值=1.71e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | vch:VC_0582 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=42.806; 覆盖度=76.164; E 值=2.97e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release |