基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA08G112410 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr08:29237864-29240323 (+) |
| 描述 | Similar to SRS5: Protein SHI RELATED SEQUENCE 5 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_031537 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g51060 |
转录激活剂,结合 5'-ACTCTAC-3' 上的 DNA,促进生长素稳态调节基因表达(例如 YUC 基因),以及影响雄蕊发育、细胞扩张和开花时间的基因。 |
STY1 and STY2 promote the formation of apical tissues during Arabidopsis gynoecium development.2002 · DOI: 10.1242/dev.129.20.4707 STY1 regulates auxin homeostasis and affects apical-basal patterning of the Arabidopsis gynoecium.2006 · DOI: 10.1111/j.1365-313x.2006.02775.x Functionally redundant SHI family genes regulate Arabidopsis gynoecium development in a dose-dependent manner.2006 · DOI: 10.1111/j.1365-313x.2006.02774.x Auxin can act independently of CRC, LUG, SEU, SPT and STY1 in style development but not apical-basal patterning of the Arabidopsis gynoecium.2008 · DOI: 10.1111/j.1469-8137.2008.02625.x
|
At1g19790 |
转录激活剂,结合 5'-ACTCTAC-3' 上的 DNA,促进生长素稳态调节基因表达,以及影响雄蕊发育、细胞扩张和开花时间的基因。 | |
At5g66350 |
转录激活剂,结合 5'-ACTCTAC-3' 上的 DNA,促进生长素稳态调节基因表达(例如 YUC 基因),以及影响雄蕊发育、细胞扩张和开花时间的基因。 | 暂无已核实直接文献 |
At1g75520 |
转录激活剂,结合 5'-ACTCTAC-3' 上的 DNA,促进生长素稳态调节基因表达,以及影响雄蕊发育、细胞扩张和开花时间的基因。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.728; 覆盖度=106.021; E 值=1.9e-69; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009299 | mRNA transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.645; 覆盖度=101.832; E 值=7.03e-75; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009555 | pollen development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=52.308; 覆盖度=68.063; E 值=4.91e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009740 | gibberellic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=52.308; 覆盖度=68.063; E 值=4.91e-67; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009851 | auxin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=52.308; 覆盖度=68.063; E 值=4.91e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048653 | anther development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=52.308; 覆盖度=68.063; E 值=4.91e-67; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046982 | protein heterodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.273; 覆盖度=69.11; E 值=8.72e-76; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G19790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.645; 覆盖度=101.832; E 值=7.03e-75 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G75520 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=42.118; 覆盖度=106.283; E 值=4.39e-78 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G51060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=52.273; 覆盖度=69.11; E 值=8.72e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G66350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=52.308; 覆盖度=68.063; E 值=4.91e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:101251254 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.728; 覆盖度=106.021; E 值=1.9e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release |