Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA08G060070 |
|---|---|
| Query reference | TK1151 |
| Location | Chr08:15416352-15418037 (-) |
| Description | Protein of unknown function |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018438 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g41800 |
Prevents hypocotyl epidermal cells elongation by modulating the pectin status in cell walls. | |
At4g32460 |
May positively regulate PME3 activity in cell-wall pectin modification and associated development. | |
At5g25460 |
Involved in the regulation of testa rupture during seed germination. | |
At5g11420 |
Together with BIIDXI, acts as a positive regulator of PME3 activity during several developmental processes, including seed germination and endosperm (testa) rupture at the micropyle, probably by modulating the pectin status in cell walls. | |
At1g80240 |
Protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 1. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009624 | response to nematode | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009630 | gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009664 | plant-type cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009845 | seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010015 | root morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.762; coverage=95.013; evalue=1.75e-137; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045489 | pectin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048598 | embryonic morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048608 | reproductive structure development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051511 | negative regulation of unidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902066 | regulation of cell wall pectin metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905421 | regulation of plant organ morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000012 | regulation of auxin polar transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.762; coverage=95.013; evalue=1.75e-137; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.771; coverage=96.325; evalue=2.69e-135; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.762; coverage=95.013; evalue=1.75e-137; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030234 | enzyme regulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G80240 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=51.744; coverage=90.289; evalue=1.15e-130 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G41800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=68.314; coverage=90.289; evalue=4.37e-176 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G32460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.811; coverage=97.113; evalue=3.5e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G11420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.771; coverage=96.325; evalue=2.69e-135 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G25460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=52.762; coverage=95.013; evalue=1.75e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release |