基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

基因 ID	`TkA08G048680`
当前查询版本	TK1151
位置	Chr08:12380377-12381284 (+)
描述	Similar to FDM3: Factor of DNA methylation 3 (Arabidopsis thaliana OX%3D3702)
注释来源组装	GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_017815 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释；下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。

当前查询返回来自 OH1004 注释条目的 12 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID	可能功能	对应论文 / DOI
`At3g12550`	与 FDM4 和 FDM5 关联，参与 RNA 导向的 DNA 甲基化 (RdDM)。	A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.2012 · DOI: 10.1093/nar/gks034
`At1g15910`	与 IDN2 和 FDM2/IDNL2 形成复合物，这是 RNA 指导的 DNA 甲基化所需的，并且在 RdDM 途径的下游步骤发挥作用。	A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.2012 · DOI: 10.1093/nar/gks034 IDN2 and its paralogs form a complex required for RNA-directed DNA methylation.2012 · DOI: 10.1371/journal.pgen.1002693 INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.2012 · DOI: 10.1073/pnas.1206638109
`At4g00380`	与 IDN2 和 FDM1/IDNL1 形成复合物，这是 RNA 指导的 DNA 甲基化所需的，并且在 RdDM 途径的下游步骤发挥作用。	A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.2012 · DOI: 10.1093/nar/gks034 IDN2 and its paralogs form a complex required for RNA-directed DNA methylation.2012 · DOI: 10.1371/journal.pgen.1002693 INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.2012 · DOI: 10.1073/pnas.1206638109
`At1g80790`	与 FDM3 和 FDM4 联合作用，实现 RNA 指导的 DNA 甲基化。	A subgroup of SGS3-like proteins act redundantly in RNA-directed DNA methylation.2012 · DOI: 10.1093/nar/gks034

水稻

当前来源表未检出该物种的同源命中。

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型	ID	名称	命名空间	证据	来源
GO	GO:0010569	regulation of double-strand break repair via homologous recombination	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=39.64; 覆盖度=62.712; E 值=1.67e-34; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032259	methylation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.711; 覆盖度=68.362; E 值=1.71e-25; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046686	response to cadmium ion	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=39.64; 覆盖度=62.712; E 值=1.67e-34; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080188	gene silencing by siRNA-directed DNA methylation	生物过程	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.256; 覆盖度=62.994; E 值=6.46e-37; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.256; 覆盖度=62.994; E 值=6.46e-37; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=39.64; 覆盖度=62.712; E 值=1.67e-34; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.238; 覆盖度=67.514; E 值=1.15e-33; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	细胞组分	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.82; 覆盖度=67.514; E 值=6.89e-34; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.82; 覆盖度=67.514; E 值=6.89e-34; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003723	RNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=39.64; 覆盖度=62.712; E 值=1.67e-34; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003725	double-stranded RNA binding	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.82; 覆盖度=67.514; E 值=6.89e-34; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008168	methyltransferase activity	分子功能	Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.711; 覆盖度=68.362; E 值=1.71e-25; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G13790	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.711; 覆盖度=68.362; E 值=1.71e-25	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G15910	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.82; 覆盖度=67.514; E 值=6.89e-34	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G12550	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=41.256; 覆盖度=62.994; E 值=6.46e-37	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G48670	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=39.64; 覆盖度=62.712; E 值=1.67e-34	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G00380	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.238; 覆盖度=67.514; E 值=1.15e-33	UniProtKB/Swiss-Prot DAT 2026 current_release