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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA07G441260
Query referenceTK1151
LocationChr07:111770270-111771948 (-)
DescriptionSimilar to THI1-1: Thiamine thiazole synthase 1%2C chloroplastic (Vitis vinifera OX%3D29760)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_030955 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 18 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g54770 Involved in biosynthesis of the thiamine precursor thiazole.
Point mutation is responsible for Arabidopsis tz-201 mutant phenotype affecting thiamin biosynthesis.2003 · DOI: 10.1093/pcp/pcg104
THI1, a protein involved in the biosynthesis of thiamin in Arabidopsis thaliana: structural analysis of THI1(A140V) mutant.2014 · DOI: 10.1016/j.bbapap.2014.03.005
THI1, a Thiamine Thiazole Synthase, Interacts with Ca2+-Dependent Protein Kinase CPK33 and Modulates the S-Type Anion Channels and Stomatal Closure in Arabidopsis.2016 · DOI: 10.1104/pp.15.01649
Thi1, a thiamine biosynthetic gene in Arabidopsis thaliana, complements bacterial defects in DNA repair.1996 · DOI: 10.1007/bf00042231

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006974DNA damage responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009228thiamine biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0052837thiazole biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stromaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009579thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010319stromuleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005506iron ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019904protein domain specific bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IPI:CAFAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0160205cysteine-dependent adenosine diphosphate thiazole synthase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G54770KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=80.056; coverage=82.217; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGcit:102626594KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=83.193; coverage=82.448; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGvvi:100260728KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=83.186; coverage=78.291; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGvvi:100265774KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=80.899; coverage=82.217; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release