基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G441230 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:111767810-111768124 (+) |
| 描述 | Similar to ROPGEF1: Rop guanine nucleotide exchange factor 1 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_009692 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 9 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g38430 |
鸟嘌呤核苷酸交换因子 ,通过促进 GDP 与 GTP 的交换,充当 RopGTP 酶的激活剂。 |
Members of a novel class of Arabidopsis Rho guanine nucleotide exchange factors control Rho GTPase-dependent polar growth.2006 · DOI: 10.1105/tpc.105.036434
|
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009664 | plant-type cell wall organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=55.106; 覆盖度=75.441; E 值=2.46e-169; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009860 | pollen tube growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080092 | regulation of pollen tube growth | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000012 | regulation of auxin polar transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016324 | apical plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005085 | guanyl-nucleotide exchange factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G55660 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=49.682; 覆盖度=75.602; E 值=4.58e-144 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G00460 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=55.291; 覆盖度=60.674; E 值=6.22e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G38430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=62.697; 覆盖度=91.653; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G02010 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=55.106; 覆盖度=75.441; E 值=2.46e-169 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G05940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.741; 覆盖度=89.246; E 值=6.57e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release |