基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G332550 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:83142593-83145138 (+) |
| 描述 | Similar to MYB3R5: Transcription factor MYB3R-5 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_018487 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 29 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g02320 |
转录因子,可结合基因启动子中的5'-AACGG-3'基序(通过相似性预测)。 | 暂无已核实直接文献 |
At5g11510 |
结合基因启动子中的 5'-AACGG-3' 基序的转录因子。 |
R1R2R3-Myb proteins positively regulate cytokinesis through activation of KNOLLE transcription in Arabidopsis thaliana.2007 · DOI: 10.1242/dev.02801 Laser microdissection of Arabidopsis cells at the powdery mildew infection site reveals site-specific processes and regulators.2010 · DOI: 10.1073/pnas.0912492107
|
At4g32730 |
结合基因启动子中 5'-AACGG-3' 基序的转录因子。 | |
At3g09370 |
转录因子,可结合基因启动子中的5'-AACGG-3'基序(通过相似性预测)。 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os01g0841500 |
参与非生物胁迫反应的转录因子。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.961; 覆盖度=82.4; E 值=2.38e-138; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008285 | negative regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.524; 覆盖度=89.12; E 值=5.15e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009620 | response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009723 | response to ethylene | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.961; 覆盖度=82.4; E 值=2.38e-138; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009753 | response to jasmonic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.961; 覆盖度=82.4; E 值=2.38e-138; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032465 | regulation of cytokinesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032875 | regulation of DNA endoreduplication | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.524; 覆盖度=89.12; E 值=5.15e-119; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901002 | positive regulation of response to salt stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.524; 覆盖度=89.12; E 值=5.15e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901181 | negative regulation of cellular response to caffeine | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902584 | positive regulation of response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.524; 覆盖度=89.12; E 值=5.15e-119; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005819 | spindle | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009524 | phragmoplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070176 | DRM complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.961; 覆盖度=82.4; E 值=2.38e-138; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.961; 覆盖度=82.4; E 值=2.38e-138; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=71.676; 覆盖度=27.68; E 值=2.8e-82; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G09370 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=47.961; 覆盖度=82.4; E 值=2.38e-138 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G32730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=71.676; 覆盖度=27.68; E 值=2.8e-82 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G02320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.528; 覆盖度=92.16; E 值=5.8e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G11510 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=71.429; 覆盖度=28.0; E 值=1.97e-84 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0841500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=44.524; 覆盖度=89.12; E 值=5.15e-119 | UniProtKB/Swiss-Prot DAT 2026 current_release |