Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G157450 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:40528910-40532250 (+) |
| Description | Similar to APUM5: Pumilio homolog 5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028452 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 16 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g25880 |
Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. | No verified direct reference in this release |
At3g20250 |
Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. | No verified direct reference in this release |
At3g10360 |
Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. | No verified direct reference in this release |
At2g29190 |
Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. | No verified direct reference in this release |
At2g29200 |
Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of target mRNAs. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006417 | regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006970 | response to osmotic stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009819 | drought recovery | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010608 | post-transcriptional regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061158 | 3'-UTR-mediated mRNA destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.462; coverage=117.989; evalue=1.09e-176; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.462; coverage=117.989; evalue=1.09e-176; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=62.209; coverage=45.503; evalue=4.45e-148; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003727 | single-stranded RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.516; coverage=53.307; evalue=6.32e-179; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003730 | mRNA 3'-UTR binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=62.209; coverage=45.503; evalue=4.45e-148; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G29190 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=62.209; coverage=45.503; evalue=4.45e-148 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G25880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=39.462; coverage=117.989; evalue=1.09e-176 | UniProtKB/Swiss-Prot DAT 2026 current_release |