Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G081590 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:21332658-21340104 (-) |
| Description | Similar to PHYB: Phytochrome B (Nicotiana tabacum OX%3D4097) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_032340 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 47 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g18130 |
Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006325 | chromatin organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009266 | response to temperature stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009408 | response to heat | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009584 | detection of visible light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009585 | red, far-red light phototransduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009630 | gravitropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009638 | phototropism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009643 | photosynthetic acclimation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009649 | entrainment of circadian clock | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009687 | abscisic acid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009867 | jasmonic acid mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010029 | regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010148 | transpiration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010161 | red light signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010202 | response to low fluence red light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010218 | response to far red light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010374 | stomatal complex development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010617 | circadian regulation of calcium ion oscillation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015979 | photosynthesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017007 | protein-bilin linkage | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017009 | protein-phycocyanobilin linkage | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=78.851; coverage=94.569; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017012 | protein-phytochromobilin linkage | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071588 | hydrogen peroxide mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000155 | phosphorelay sensor kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009881 | photoreceptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009883 | red or far-red light photoreceptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031516 | far-red light photoreceptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031517 | red light photoreceptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.35; coverage=97.069; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990841 | promoter-specific chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G18790 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.958; coverage=95.776; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gmx:100794865 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=78.851; coverage=94.569; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sly:101262847 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=79.733; coverage=96.983; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |