基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA07G020580 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr07:5561400-5562496 (+) |
| 描述 | Similar to XBAT35: Putative E3 ubiquitin-protein ligase XBAT35 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_023095 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 19 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g23280 |
当与E2酶UBC8在体外结合时,未观察到E3泛素-蛋白连接酶活性。 | 暂无已核实直接文献 |
At4g14365 |
当与E2酶UBC8在体外结合时,未观察到E3泛素-蛋白连接酶活性。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os07g0446100 |
可能的E3泛素蛋白连接酶XBOS34。 | 暂无已核实直接文献 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006457 | protein folding | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043067 | regulation of programmed cell death | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045036 | protein targeting to chloroplast | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070417 | cellular response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009707 | chloroplast outer membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030941 | chloroplast targeting sequence binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051861 | glycolipid binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G23280 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.812; 覆盖度=105.286; E 值=1.42e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G14365 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=53.106; 覆盖度=70.925; E 值=3.94e-103 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G35450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.2; 覆盖度=27.533; E 值=3.43e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0446100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.558; 覆盖度=116.52; E 值=6.97e-151 | UniProtKB/Swiss-Prot DAT 2026 current_release |