Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G479570 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:118824284-118825623 (-) |
| Description | Similar to CAPH2: Condensin-2 complex subunit H2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_022529 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 16 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g27870 |
Acts in the modification of cell walls via demethylesterification of cell wall pectin. | No verified direct reference in this release |
At5g49180 |
Acts in the modification of cell walls via demethylesterification of cell wall pectin. | No verified direct reference in this release |
At3g05610 |
Acts in the modification of cell walls via demethylesterification of cell wall pectin. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010032 | meiotic chromosome condensation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042545 | cell wall modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.225; coverage=43.943; evalue=2.7e-172; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045490 | pectin catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.225; coverage=43.943; evalue=2.7e-172; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045739 | positive regulation of DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048358 | mucilage pectin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.357; coverage=44.339; evalue=5.16e-165; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051306 | mitotic sister chromatid separation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000793 | condensed chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000796 | condensin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.225; coverage=43.943; evalue=2.7e-172; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090406 | pollen tube | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.637; coverage=44.497; evalue=1.58e-141; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030599 | pectinesterase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.225; coverage=43.943; evalue=2.7e-172; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046910 | pectinesterase inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.225; coverage=43.943; evalue=2.7e-172; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G05610 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.268; coverage=44.101; evalue=1.59e-161 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G06830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.637; coverage=44.497; evalue=1.58e-141 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G16730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.815; coverage=53.444; evalue=1.52e-177 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G27870 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.225; coverage=43.943; evalue=2.7e-172 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G49180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=45.357; coverage=44.339; evalue=5.16e-165 | UniProtKB/Swiss-Prot DAT 2026 current_release |