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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA06G449610
Query referenceTK1151
LocationChr06:111067968-111079724 (+)
DescriptionSimilar to CCD7: Carotenoid cleavage dioxygenase 7%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_022768 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g44990 Involved in strigolactones biosynthesis by cleaving asymmetrically a variety of linear and cyclic carotenoids at the 9-10 double bond.
MAX3/CCD7 is a carotenoid cleavage dioxygenase required for the synthesis of a novel plant signaling molecule.2004 · DOI: 10.1016/j.cub.2004.06.061
Characterization of three members of the Arabidopsis carotenoid cleavage dioxygenase family demonstrates the divergent roles of this multifunctional enzyme family.2006 · DOI: 10.1111/j.1365-313x.2006.02666.x

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0550600 Involved in strigolactones biosynthesis by cleaving asymmetrically a variety of linear and cyclic carotenoids at the 9-10 double bond.
The rice HIGH-TILLERING DWARF1 encoding an ortholog of Arabidopsis MAX3 is required for negative regulation of the outgrowth of axillary buds.2006 · DOI: 10.1111/j.1365-313x.2006.02916.x

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009635response to herbicideBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009639response to red or far red lightBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.342; coverage=89.951; evalue=1.97e-19; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009688abscisic acid biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.342; coverage=89.951; evalue=1.97e-19; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009733response to auxinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.571; coverage=90.762; evalue=0.0; UniProt GO evidence=IMP:GrameneUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009926auxin polar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010114response to red lightBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.342; coverage=89.951; evalue=1.97e-19; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010223secondary shoot formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016121carotene catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016124xanthophyll catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901601strigolactone biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009535chloroplast thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.342; coverage=89.951; evalue=1.97e-19; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stromaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004497monooxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.237; coverage=90.276; evalue=1.07e-19; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010436carotenoid dioxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.839; coverage=86.548; evalue=7.15e-37; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00455499-cis-epoxycarotenoid dioxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0102162all-trans-8'-apo-beta-carotenal 15,15'-oxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.839; coverage=86.548; evalue=7.15e-37; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:01023959-cis-beta-carotene 9',10'-cleavage oxygenase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGag:ACP17973KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.237; coverage=90.276; evalue=1.07e-19UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G44990KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.0; coverage=94.814; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G24220KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.342; coverage=89.951; evalue=1.97e-19UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0550600KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.571; coverage=90.762; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsyn:sll1541KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=28.839; coverage=86.548; evalue=7.15e-37UniProtKB/Swiss-Prot DAT 2026 current_release