Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G202560 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:52626741-52628861 (+) |
| Description | Similar to PUX1: Plant UBX domain-containing protein 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_023871 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 32 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g27310 |
Regulates CDC48A by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000423 | mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031401 | positive regulation of protein modification process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032510 | endosome to lysosome transport via multivesicular body sorting pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032984 | protein-containing complex disassembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.551; coverage=88.768; evalue=1.84e-95; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035265 | organ growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.551; coverage=88.768; evalue=1.84e-95; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036503 | ERAD pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042593 | glucose homeostasis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043335 | protein unfolding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046324 | regulation of D-glucose import across plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.551; coverage=88.768; evalue=1.84e-95; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.551; coverage=88.768; evalue=1.84e-95; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005813 | centrosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009898 | cytoplasmic side of plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012506 | vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030659 | cytoplasmic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031901 | early endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031902 | late endosome membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.193; coverage=58.333; evalue=5.74e-11; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904949 | ATPase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051117 | ATPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.551; coverage=88.768; evalue=1.84e-95; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G27310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.551; coverage=88.768; evalue=1.84e-95 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:79058 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.931; coverage=47.464; evalue=6.92e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:80700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.193; coverage=58.333; evalue=5.74e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:66530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.767; coverage=52.899; evalue=4.52e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:68938 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.481; coverage=78.261; evalue=2.35e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |