Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G105850 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:27994592-27997542 (+) |
| Description | Similar to ATG5: Autophagy protein 5 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024817 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 57 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g17290 |
Required for autophagy. |
Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways.2005 · DOI: 10.1104/pp.105.060673
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: A2X052 |
Required for autophagy. | No verified direct reference in this release |
Os02g0117800 |
Required for autophagy. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000045 | autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000422 | autophagy of mitochondrion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.27; coverage=105.523; evalue=6.86e-122; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000423 | mitophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001974 | blood vessel remodeling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002376 | immune system process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002718 | regulation of cytokine production involved in immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006995 | cellular response to nitrogen starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009267 | cellular response to starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009410 | response to xenobiotic stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009620 | response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010040 | response to iron(II) ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010508 | positive regulation of autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019883 | antigen processing and presentation of endogenous antigen | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031397 | negative regulation of protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032480 | negative regulation of type I interferon production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034727 | piecemeal microautophagy of the nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035973 | aggrephagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0039689 | negative stranded viral RNA replication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042311 | vasodilation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042594 | response to starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043687 | post-translational protein modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045824 | negative regulation of innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050687 | negative regulation of defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050765 | negative regulation of phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051279 | regulation of release of sequestered calcium ion into cytosol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060047 | heart contraction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061684 | chaperone-mediated autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061739 | protein lipidation involved in autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062029 | positive regulation of stress granule assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070257 | positive regulation of mucus secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071500 | cellular response to nitrosative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0099072 | regulation of postsynaptic membrane neurotransmitter receptor levels | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901096 | regulation of autophagosome maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902017 | regulation of cilium assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902617 | response to fluoride | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904093 | negative regulation of autophagic cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904973 | positive regulation of viral translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000377 | regulation of reactive oxygen species metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005776 | autophagosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005930 | axoneme | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030670 | phagocytic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034045 | phagophore assembly site membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034274 | Atg12-Atg5-Atg16 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044233 | mitochondria-associated endoplasmic reticulum membrane contact site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.27; coverage=105.523; evalue=6.86e-122; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061908 | phagophore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019776 | Atg8-family ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.27; coverage=105.523; evalue=6.86e-122; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G17290 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.446; coverage=96.512; evalue=2.08e-148 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0117800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=53.994; coverage=105.523; evalue=1.69e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:9474 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.524; coverage=91.57; evalue=1.15e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:11793 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=29.524; coverage=91.57; evalue=1.79e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release |