Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G096540 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:25697922-25698960 (-) |
| Description | Similar to PAS2: Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_014003 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 18 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g10480 |
Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. |
Pasticcino2 is a protein tyrosine phosphatase-like involved in cell proliferation and differentiation in Arabidopsis.2002 · DOI: 10.1046/j.1365-313x.2002.01456.x Arabidopsis PASTICCINO2 is an antiphosphatase involved in regulation of cyclin-dependent kinase A.2006 · DOI: 10.1105/tpc.105.040485
|
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0271200 |
Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. | No verified direct reference in this release |
Os01g0150200 |
Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0030148 | sphingolipid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030497 | fatty acid elongation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035338 | long-chain fatty-acyl-CoA biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.889; coverage=94.937; evalue=2.05e-51; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042761 | very long-chain fatty acid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048640 | negative regulation of developmental growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050732 | negative regulation of peptidyl-tyrosine phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051302 | regulation of cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009923 | fatty acid elongase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004725 | protein tyrosine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018812 | 3-hydroxyacyl-CoA dehydratase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.889; coverage=94.937; evalue=1.37e-51; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0102158 | very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G10480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=66.949; coverage=99.578; evalue=1.3e-110 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:613886 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.889; coverage=94.937; evalue=1.37e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0150200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.877; coverage=95.781; evalue=8.18e-102 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0271200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.079; coverage=95.781; evalue=9.04e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:201562 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=40.889; coverage=94.937; evalue=2.05e-51 | UniProtKB/Swiss-Prot DAT 2026 current_release |