Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA06G075900`
Query reference	TK1151
Location	Chr06:20356207-20358608 (-)
Description	Similar to MYB88: Transcription factor MYB88 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_025195 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 35 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g14350`	Transcription factor that binds to DNA in promoters cis- regulatory element 5'-GGCGCGC-3' of cell cycle genes, including cyclins, cyclin-dependent kinases (CDKs), and components of the pre- replication complex.	Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis.2011 · DOI: 10.1038/emboj.2011.240
`At2g02820`	Transcription factor that binds to DNA in promoters cis- regulatory element 5'-GGCGCGC-3' of cell cycle genes, including cyclins, cyclin-dependent kinases (CDKs), and components of the pre- replication complex.	The Arabidopsis R2R3 MYB proteins FOUR LIPS and MYB88 restrict divisions late in the stomatal cell lineage.2005 · DOI: 10.1105/tpc.105.034116 Regulation of cell proliferation in the stomatal lineage by the Arabidopsis MYB FOUR LIPS via direct targeting of core cell cycle genes.2010 · DOI: 10.1105/tpc.110.074609 Role of the stomatal development regulators FLP/MYB88 in abiotic stress responses.2010 · DOI: 10.1111/j.1365-313x.2010.04364.x Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis.2011 · DOI: 10.1038/emboj.2011.240 FOUR LIPS and MYB88 conditionally restrict the G1/S transition during stomatal formation.2013 · DOI: 10.1093/jxb/ert313 Deep functional redundancy between FAMA and FOUR LIPS in stomatal development.2014 · DOI: 10.1111/tpj.12489 Requirement for A-type cyclin-dependent kinase and cyclins for the terminal division in the stomatal lineage of Arabidopsis.2014 · DOI: 10.1093/jxb/eru139 Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism.2015 · DOI: 10.1038/ncomms9822

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000278	mitotic cell cycle	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009553	embryo sac development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009554	megasporogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009629	response to gravity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009733	response to auxin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009734	auxin-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009926	auxin polar transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010052	guard cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IGI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010235	guard mother cell cytokinesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010376	stomatal complex formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010444	guard mother cell differentiation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032875	regulation of DNA endoreduplication	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045944	positive regulation of transcription by RNA polymerase II	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22; UniProt GO evidence=IDA:NTNU_SB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048527	lateral root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050891	multicellular organismal-level water homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080022	primary root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090436	leaf pavement cell development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901002	positive regulation of response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1901333	positive regulation of lateral root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902584	positive regulation of response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1902806	regulation of cell cycle G1/S phase transition	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000037	regulation of stomatal complex patterning	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22; UniProt GO evidence=IDA:HPA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031523	Myb complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22; UniProt GO evidence=IEA:Ensembl	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22; UniProt GO evidence=IDA:NTNU_SB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990837	sequence-specific double-stranded DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22; UniProt GO evidence=IDA:ARUK-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G14350	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=63.235; coverage=49.275; evalue=3.84e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G02820	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=58.125; coverage=57.971; evalue=1.95e-53	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:4605	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.211; coverage=44.565; evalue=7.19e-22	UniProtKB/Swiss-Prot DAT 2026 current_release