基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA06G075610 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr06:20263140-20264886 (+) |
| 描述 | Similar to WHY1: Single-stranded DNA-binding protein WHY1%2C chloroplastic (Solanum tuberosum OX%3D4113) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_025205 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 28 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g02740 |
在叶绿体和细胞核中发挥作用的单链 DNA 结合蛋白。 | |
At1g14410 |
在叶绿体和细胞核中发挥作用的单链 DNA 结合蛋白。 |
A "Whirly" transcription factor is required for salicylic acid-dependent disease resistance in Arabidopsis.2004 · DOI: 10.1016/s1534-5807(04)00028-0 Single-stranded DNA binding factor AtWHY1 modulates telomere length homeostasis in Arabidopsis.2007 · DOI: 10.1111/j.1365-313x.2006.02974.x
|
At1g71260 |
与线粒体 DNA 结合的单链 DNA 结合蛋白,可能在基因表达机制的调节中发挥作用。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=71.946; 覆盖度=87.698; E 值=1.34e-112; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009627 | systemic acquired resistance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009863 | salicylic acid mediated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032204 | regulation of telomere maintenance | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IMP:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032211 | negative regulation of telomere maintenance via telomerase | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045910 | negative regulation of DNA recombination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.391; 覆盖度=73.016; E 值=2.24e-91; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=TAS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=71.946; 覆盖度=87.698; E 值=1.34e-112; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=71.946; 覆盖度=87.698; E 值=1.34e-112; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042644 | chloroplast nucleoid | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990391 | DNA repair complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000987 | cis-regulatory region sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003697 | single-stranded DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003714 | transcription corepressor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.391; 覆盖度=73.016; E 值=2.24e-91; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042162 | telomeric DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G14410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=68.142; 覆盖度=89.683; E 值=1.23e-112 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G02740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=71.946; 覆盖度=87.698; E 值=1.34e-112 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sot:102577544 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=76.852; 覆盖度=85.714; E 值=1e-120 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sot:102577630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=47.093; 覆盖度=68.254; E 值=2.46e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100170235 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.391; 覆盖度=73.016; E 值=2.24e-91 | UniProtKB/Swiss-Prot DAT 2026 current_release |