Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA06G061780 |
|---|---|
| Query reference | TK1151 |
| Location | Chr06:16679865-16685524 (-) |
| Description | Similar to NERD: Zinc finger CCCH domain-containing protein 19 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_025397 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 20 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: Q9SIV5 |
Plays a central role in integrating RNA silencing and chromatin signals in 21 nt siRNA-dependent DNA methylation on cytosine pathway leading to transcriptional gene silencing of specific sequences. | No verified direct reference in this release |
At3g51120 |
Zinc finger CCCH domain-containing protein 44. | No verified direct reference in this release |
At5g08430 |
Uncharacterized protein At5g08430. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032259 | methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080188 | gene silencing by siRNA-directed DNA methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016593 | Cdc73/Paf1 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042393 | histone binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046975 | histone H3K36 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140537 | transcription regulator activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140938 | histone H3 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140946 | histone H3K4 dimethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140951 | histone H3K27 trimethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140952 | histone H3K27 dimethyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990269 | RNA polymerase II C-terminal domain phosphoserine binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G16485 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.76; coverage=101.255; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G08430 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.856; coverage=30.209; evalue=1.19e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:54904 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=46.479; coverage=5.941; evalue=1.44e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release |