基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G442780 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:110587821-110592540 (-) |
| 描述 | Similar to SYT3: Synaptotagmin-3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_022045 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 29 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At5g04220 |
可能参与膜运输。 | 暂无已核实直接文献 |
At1g20080 |
可能在调节非常规蛋白质从细胞质到细胞外基质的运输中发挥重要作用。 | |
At2g20990 |
在冰冻和渗透胁迫期间维持质膜完整性中起重要作用。 |
Arabidopsis synaptotagmin 1 is required for the maintenance of plasma membrane integrity and cell viability.2008 · DOI: 10.1105/tpc.108.063859 Calcium-dependent freezing tolerance in Arabidopsis involves membrane resealing via synaptotagmin SYT1.2008 · DOI: 10.1105/tpc.108.062679
|
At1g05500 |
可能参与膜运输。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006612 | protein targeting to membrane | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006869 | lipid transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006897 | endocytosis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007029 | endoplasmic reticulum organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009306 | protein secretion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.455; 覆盖度=100.0; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009612 | response to mechanical stimulus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009615 | response to virus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032456 | endocytic recycling | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046740 | transport of virus in host, cell to cell | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061817 | endoplasmic reticulum-plasma membrane tethering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.455; 覆盖度=100.0; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005768 | endosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.455; 覆盖度=100.0; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009898 | cytoplasmic side of plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010008 | endosome membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.469; 覆盖度=104.0; E 值=9.61e-83; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032541 | cortical endoplasmic reticulum | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033011 | perinuclear theca | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.469; 覆盖度=104.0; E 值=9.61e-83; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140268 | endoplasmic reticulum-plasma membrane contact site | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019992 | diacylglycerol binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901981 | phosphatidylinositol phosphate binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G05500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=31.469; 覆盖度=104.0; E 值=9.61e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G20080 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.455; 覆盖度=100.0; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G20990 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=51.268; 覆盖度=100.364; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G04220 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=58.652; 覆盖度=99.818; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G11100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=32.236; 覆盖度=104.909; E 值=1e-77 | UniProtKB/Swiss-Prot DAT 2026 current_release |