基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G338900 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:83783650-83786455 (-) |
| 描述 | Similar to RABB1C: Ras-related protein RABB1c (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_020995 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 31 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At4g17170 |
细胞内囊泡运输和蛋白质运输。 | 暂无已核实直接文献 |
At4g31390 |
激酶可以磷酸化生育酚环化酶 VTE1,这是生育酚代谢的关键酶,参与氧化 α-生育酚醌的再循环,可能将其稳定在质体球中。 |
AtACDO1, an ABC1-like kinase gene, is involved in chlorophyll degradation and the response to photooxidative stress in Arabidopsis.2012 · DOI: 10.1093/jxb/ers072
|
At1g71810 |
未表征的含 aarF 结构域的蛋白激酶 At1g71810,叶绿体的。 | 暂无已核实直接文献 |
At1g79600 |
激酶可以磷酸化生育酚环化酶 VTE1,这是生育酚代谢的关键酶,参与氧化 α-生育酚醌的再循环,可能将其稳定在质体球中。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006995 | cellular response to nitrogen starvation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009767 | photosynthetic electron transport chain | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010027 | thylakoid membrane organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010109 | regulation of photosynthesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015996 | chlorophyll catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031540 | regulation of anthocyanin biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080177 | plastoglobule organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080183 | response to photooxidative stress | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901562 | response to paraquat | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902171 | regulation of tocopherol cyclase activity | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902326 | positive regulation of chlorophyll biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1904143 | positive regulation of carotenoid biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.231; 覆盖度=41.139; E 值=4.13e-53; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.231; 覆盖度=41.139; E 值=4.13e-53; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010287 | plastoglobule | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003924 | GTPase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004674 | protein serine/threonine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005525 | GTP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0106310 | protein serine kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G17170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=83.495; 覆盖度=32.595; E 值=2.71e-54 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G31390 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=85.185; 覆盖度=34.177; E 值=2.17e-52 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100127017 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=69.231; 覆盖度=41.139; E 值=4.13e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | zma:100127494 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=69.231; 覆盖度=41.139; E 值=4.64e-53 | UniProtKB/Swiss-Prot DAT 2026 current_release |