基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G077290 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:20570589-20571378 (+) |
| 描述 | Similar to TFB4: General transcription and DNA repair factor IIH subunit TFB4 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_024784 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 14 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.762; 覆盖度=101.779; E 值=4.45e-57; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006289 | nucleotide-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006366 | transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.979; 覆盖度=102.135; E 值=1.95e-57; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006367 | transcription initiation at RNA polymerase II promoter | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000438 | core TFIIH complex portion of holo TFIIH complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.979; 覆盖度=102.135; E 值=1.95e-57; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000439 | transcription factor TFIIH core complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.762; 覆盖度=101.779; E 值=4.45e-57; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005669 | transcription factor TFIID complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.762; 覆盖度=101.779; E 值=4.45e-57; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005675 | transcription factor TFIIH holo complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097550 | transcription preinitiation complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.762; 覆盖度=101.779; E 值=4.45e-57; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016251 | RNA polymerase II general transcription initiation factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G18340 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.918; 覆盖度=103.915; E 值=3.38e-140 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:511896 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.979; 覆盖度=102.135; E 值=1.95e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:2967 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.762; 覆盖度=101.779; E 值=4.45e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:209357 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.631; 覆盖度=102.135; E 值=9.82e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:288651 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=36.934; 覆盖度=102.135; E 值=1e-56 | UniProtKB/Swiss-Prot DAT 2026 current_release |