基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA05G019140 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr05:5267958-5268616 (-) |
| 描述 | Similar to RCE2: Probable NEDD8-conjugating enzyme Ubc12-like (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_019108 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 14 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g09320 |
异染色质结合蛋白,优先结合长转座子并特异识别组蛋白H3的'赖氨酸-9'甲基化(H3K9me)标记,对二甲基化H3K9(H3K9me2)有更强亲和力。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.724; 覆盖度=36.709; E 值=5.45e-44; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036211 | protein modification process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.715; 覆盖度=34.684; E 值=1.96e-33; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045116 | protein neddylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.286; 覆盖度=35.443; E 值=2.6e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.286; 覆盖度=35.443; E 值=2.6e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.255; 覆盖度=34.684; E 值=9.4e-32; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.255; 覆盖度=34.684; E 值=9.4e-32; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.724; 覆盖度=36.709; E 值=5.45e-44; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.286; 覆盖度=35.443; E 值=2.6e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.255; 覆盖度=34.684; E 值=9.4e-32; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.715; 覆盖度=34.684; E 值=1.96e-33; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.286; 覆盖度=35.443; E 值=2.6e-45; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019787 | ubiquitin-like protein transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.724; 覆盖度=36.709; E 值=5.45e-44; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019788 | NEDD8 transferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.286; 覆盖度=35.443; E 值=2.6e-45; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061654 | NEDD8 conjugating enzyme activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.715; 覆盖度=34.684; E 值=1.96e-33; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G18600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=54.286; 覆盖度=35.443; E 值=2.6e-45 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G36800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=51.724; 覆盖度=36.709; E 值=5.45e-44 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:22192 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=45.255; 覆盖度=34.684; E 值=9.4e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xla:446800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=46.715; 覆盖度=34.684; E 值=1.96e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | xtr:394553 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=45.985; 覆盖度=34.684; E 值=9.79e-33 | UniProtKB/Swiss-Prot DAT 2026 current_release |