基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G456080 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:114949807-114951893 (-) |
| 描述 | Similar to MRTO4: mRNA turnover protein 4 homolog (Bos taurus OX%3D9913) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_016881 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 12 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0000027 | ribosomal large subunit assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000956 | nuclear-transcribed mRNA catabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042273 | ribosomal large subunit biogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180023 | cytosolic large ribosomal subunit assembly | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.874; 覆盖度=103.93; E 值=4.91e-46; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902626 | assembly of large subunit precursor of preribosome | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.874; 覆盖度=103.93; E 值=4.91e-46; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.874; 覆盖度=103.93; E 值=4.91e-46; UniProt GO evidence=HDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030684 | preribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.874; 覆盖度=103.93; E 值=4.91e-46; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030687 | preribosome, large subunit precursor | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.182; 覆盖度=96.07; E 值=9.55e-69; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | bta:509932 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=49.091; 覆盖度=96.07; E 值=5.94e-70 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0276411 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=39.64; 覆盖度=96.943; E 值=1.8e-57 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:51154 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.182; 覆盖度=96.07; E 值=9.55e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:69902 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=50.704; 覆盖度=93.013; E 值=1.52e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:2539913 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=34.874; 覆盖度=103.93; E 值=4.91e-46 | UniProtKB/Swiss-Prot DAT 2026 current_release |