RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDTkA04G431440
Query referenceTK1151
LocationChr04:108818401-108823522 (-)
DescriptionSimilar to REV1: DNA repair protein REV1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_038456 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 23 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g44750 Deoxycytidyl transferase involved in DNA damage tolerance (DDT) and translesion synthesis (TLS).
AtREV1, a Y-family DNA polymerase in Arabidopsis, has deoxynucleotidyl transferase activity in vitro.2007 · DOI: 10.1104/pp.107.101980
Two translesion synthesis DNA polymerase genes, AtPOLH and AtREV1, are involved in development and UV light resistance in Arabidopsis.2008 · DOI: 10.1016/j.jplph.2007.11.012

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006302double-strand break repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.619; coverage=41.339; evalue=7.19e-72; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006974DNA damage responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009411response to UVBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010224response to UV-BBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019985translesion synthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.619; coverage=41.339; evalue=7.19e-72; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042276error-prone translesion synthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070987error-free translesion synthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071897DNA biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.619; coverage=41.339; evalue=7.19e-72; UniProt GO evidence=TAS:ReactomeUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035861site of double-strand breakCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043596nuclear replication forkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090734site of DNA damageCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.619; coverage=41.339; evalue=7.19e-72; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003684damaged DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003887DNA-directed DNA polymerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0017125deoxycytidyl transferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030674protein-macromolecule adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043130ubiquitin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060090molecular adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G44750KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=43.321; coverage=109.055; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgga:418703KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=37.619; coverage=41.339; evalue=7.19e-72UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:56210KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=28.31; coverage=69.882; evalue=1.55e-70UniProtKB/Swiss-Prot DAT 2026 current_release