Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA04G273720 |
|---|---|
| Query reference | TK1151 |
| Location | Chr04:69139178-69139871 (+) |
| Description | Similar to CGS1: Cystathionine gamma-synthase 1%2C chloroplastic (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_034894 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g01120 |
Catalyzes the first committed step of methionine (Met) biosynthesis. | No verified direct reference in this release |
At1g33320 |
Catalyzes the first committed step of methionine (Met) biosynthesis. | No verified direct reference in this release |
At1g79940 |
Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0307200 |
May be required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001887 | selenium compound metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.082; coverage=53.285; evalue=6.95e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006620 | post-translational protein targeting to endoplasmic reticulum membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009086 | methionine biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.822; coverage=53.285; evalue=1.49e-35; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019346 | transsulfuration | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.822; coverage=53.285; evalue=1.49e-35; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.384; coverage=53.285; evalue=7.46e-29; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005783 | endoplasmic reticulum | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005789 | endoplasmic reticulum membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.822; coverage=53.285; evalue=1.49e-35; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.082; coverage=53.285; evalue=6.95e-35; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031207 | Sec62/Sec63 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003962 | cystathionine gamma-synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.822; coverage=53.285; evalue=1.49e-35; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030170 | pyridoxal phosphate binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.822; coverage=53.285; evalue=1.49e-35; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G33320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.384; coverage=53.285; evalue=7.46e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G79940 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=56.061; coverage=48.175; evalue=4.88e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G01120 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=78.082; coverage=53.285; evalue=6.95e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0307200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=53.03; coverage=48.175; evalue=2.62e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | nta:107822634 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.822; coverage=53.285; evalue=1.49e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release |