基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G259110 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:65506677-65507441 (-) |
| 描述 | Similar to SCL18: Scarecrow-like protein 18 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_037220 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g55580 |
可能的转录因子,在营养生长发育期间需要用于腋芽(侧芽)分生组织的形成。 | 暂无已核实直接文献 |
水稻
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
Os06g0610300 |
推定转录调控因子,通过启动腋芽并促进其生长来控制水稻分蘖。 |
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006357 | regulation of transcription by RNA polymerase II | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=38.601; 覆盖度=90.61; E 值=1.17e-76; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007584 | response to nutrient | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=38.601; 覆盖度=90.61; E 值=1.17e-76; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009610 | response to symbiotic fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.961; 覆盖度=90.376; E 值=7.93e-77; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010014 | meristem initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010223 | secondary shoot formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010247 | detection of phosphate ion | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=38.601; 覆盖度=90.61; E 值=1.17e-76; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036377 | arbuscular mycorrhizal association | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.961; 覆盖度=90.376; E 值=7.93e-77; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090506 | axillary shoot meristem initiation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.961; 覆盖度=90.376; E 值=7.93e-77; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042803 | protein homodimerization activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=38.961; 覆盖度=90.376; E 值=7.93e-77; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043565 | sequence-specific DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G55580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=50.245; 覆盖度=95.775; E 值=5.46e-124 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mtr:11438339 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=38.601; 覆盖度=90.61; E 值=1.17e-76 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:107278653 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=42.132; 覆盖度=92.488; E 值=2.09e-80 | UniProtKB/Swiss-Prot DAT 2026 current_release |