Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA04G106330`
Query reference	TK1151
Location	Chr04:27680423-27681108 (-)
Description	Similar to Os02g0460200: Flowering-promoting factor 1-like protein 3 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035809 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 10 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g24860`	Modulates the competence to flowering of apical meristems.	FPF1 modulates the competence to flowering in Arabidopsis.1999 · DOI: 10.1046/j.1365-313x.1999.00461.x FPF1 promotes flowering in Arabidopsis.1997 · DOI: 10.1105/tpc.9.8.1327
`At5g10625`	Modulates the competence to flowering of apical meristems.	No verified direct reference in this release

Rice

Reference gene ID	Possible function	Papers / DOI
`Os02g0460200`	Flowering-promoting factor 1-like protein 3.	No verified direct reference in this release
`Os01g0257300`	GTP-binding protein that functions in the development of root systems, which are mediated by auxin.	Overexpression of OsRAA1 causes pleiotropic phenotypes in transgenic rice plants, including altered leaf, flower, and root development and root response to gravity.2004 · DOI: 10.1104/pp.104.041996 Biochemical character of the purified OsRAA1, a novel rice protein with GTP-binding activity, and its expression pattern in Oryza sativa.2005 · DOI: 10.1016/j.jplph.2004.12.001 Rice ROOT ARCHITECTURE ASSOCIATED1 binds the proteasome subunit RPT4 and is degraded in a D-box and proteasome-dependent manner.2008 · DOI: 10.1104/pp.108.125294

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009733	response to auxin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.259; coverage=99.083; evalue=3.12e-41; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009909	regulation of flower development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.87; coverage=105.505; evalue=2.91e-44; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009911	positive regulation of flower development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.545; coverage=100.917; evalue=1.06e-41; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010228	vegetative to reproductive phase transition of meristem	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.545; coverage=100.917; evalue=1.06e-41; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.259; coverage=99.083; evalue=3.12e-41; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000280	regulation of root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.259; coverage=99.083; evalue=3.12e-41; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.545; coverage=100.917; evalue=1.06e-41; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.259; coverage=99.083; evalue=3.12e-41; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.545; coverage=100.917; evalue=1.06e-41; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005525	GTP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.259; coverage=99.083; evalue=3.12e-41; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G10625	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=60.909; coverage=100.917; evalue=2.62e-40	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G24860	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.545; coverage=100.917; evalue=1.06e-41	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0257300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=59.259; coverage=99.083; evalue=3.12e-41	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os02g0460200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.87; coverage=105.505; evalue=2.91e-44	UniProtKB/Swiss-Prot DAT 2026 current_release