基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G098550 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:25683358-25685801 (+) |
| 描述 | Similar to RPL3: 60S ribosomal protein L3 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_035895 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 23 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0002181 | cytoplasmic translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006412 | translation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.889; 覆盖度=87.613; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=87.047; 覆盖度=86.937; E 值=0.0; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071353 | cellular response to interleukin-4 | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005773 | vacuole | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005840 | ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005925 | focal adhesion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009506 | plasmodesma | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022625 | cytosolic large ribosomal subunit | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.889; 覆盖度=87.613; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032991 | protein-containing complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.889; 覆盖度=87.613; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003735 | structural constituent of ribosome | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=86.889; 覆盖度=87.613; E 值=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008097 | 5S rRNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G43170 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=89.664; 覆盖度=87.162; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G61580 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=87.047; 覆盖度=86.937; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6122 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=67.513; 覆盖度=88.739; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:300079 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=67.513; 覆盖度=88.739; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |