Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA04G034250 |
|---|---|
| Query reference | TK1151 |
| Location | Chr04:9173303-9174617 (-) |
| Description | Similar to LBD12: LOB domain-containing protein 12 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012198 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g30130 |
LOB domain-containing protein 12. | No verified direct reference in this release |
At1g31320 |
LOB domain-containing protein 4. | No verified direct reference in this release |
At2g28500 |
LOB domain-containing protein 11. | No verified direct reference in this release |
At5g63090 |
Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility. | No verified direct reference in this release |
At1g16530 |
LOB domain-containing protein 3. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.964; coverage=51.389; evalue=4.27e-48; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009736 | cytokinin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.273; coverage=64.352; evalue=4.66e-49; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010016 | shoot system morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010087 | phloem or xylem histogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.516; coverage=57.407; evalue=1.09e-48; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048364 | root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.273; coverage=64.352; evalue=4.66e-49; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080117 | secondary growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.273; coverage=64.352; evalue=4.66e-49; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000377 | regulation of reactive oxygen species metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.964; coverage=51.389; evalue=4.27e-48; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.22; coverage=50.463; evalue=2.55e-47; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.273; coverage=64.352; evalue=4.66e-49; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001216 | DNA-binding transcription activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G07900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=64.22; coverage=50.463; evalue=2.55e-47 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G16530 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=58.273; coverage=64.352; evalue=4.66e-49 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G31320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=64.516; coverage=57.407; evalue=1.09e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G28500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=63.964; coverage=51.389; evalue=4.27e-48 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G30130 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=86.842; coverage=52.778; evalue=1.65e-69 | UniProtKB/Swiss-Prot DAT 2026 current_release |