基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA04G019760 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr04:4941061-4941984 (-) |
| 描述 | Similar to SKIP25: F-box/kelch-repeat protein SKIP25 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_036870 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 8 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009585 | red, far-red light phototransduction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.631; 覆盖度=87.186; E 值=3.11e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010017 | red or far-red light signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.631; 覆盖度=87.186; E 值=3.11e-11; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.082; 覆盖度=98.241; E 值=4.24e-115; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.082; 覆盖度=98.241; E 值=4.24e-115; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000762 | regulation of phenylpropanoid metabolic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=23.467; 覆盖度=94.221; E 值=1.26e-12; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.082; 覆盖度=98.241; E 值=4.24e-115; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.631; 覆盖度=87.186; E 值=3.11e-11; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.082; 覆盖度=98.241; E 值=4.24e-115; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G31350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=48.082; 覆盖度=98.241; E 值=4.24e-115 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G55270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=23.467; 覆盖度=94.221; E 值=1.26e-12 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G24540 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=23.631; 覆盖度=87.186; E 值=3.11e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G39590 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=25.356; 覆盖度=88.191; E 值=3.83e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release |