Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G601980 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:152879764-152887210 (+) |
| Description | Similar to At1g60070: AP-1 complex subunit gamma-2 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011561 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 30 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g60070 |
Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). | No verified direct reference in this release |
At1g23900 |
Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting at the trans-Golgi network and early endosomes (TGN/EE). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006886 | intracellular protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.875; coverage=100.111; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006896 | Golgi to vacuole transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.875; coverage=100.111; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016192 | vesicle-mediated transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.686; coverage=100.222; evalue=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032438 | melanosome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0; UniProt GO evidence=IC:ParkinsonsUK-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035646 | endosome to melanosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0060155 | platelet dense granule organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090160 | Golgi to lysosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110010 | basolateral protein secretion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.686; coverage=100.222; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005765 | lysosomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005769 | early endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005802 | trans-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005905 | clathrin-coated pit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030121 | AP-1 adaptor complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.875; coverage=100.111; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030136 | clathrin-coated vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030659 | cytoplasmic vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030665 | clathrin-coated vesicle membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032588 | trans-Golgi network membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055037 | recycling endosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005518 | collagen binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019894 | kinesin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030742 | GTP-dependent protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031267 | small GTPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035615 | clathrin adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.875; coverage=100.111; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G23900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.686; coverage=100.222; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G60070 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.875; coverage=100.111; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:164 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.701; coverage=99.446; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:11765 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=44.259; coverage=99.446; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | pon:100173736 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=43.367; coverage=99.446; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |