Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G574630 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:145666273-145670493 (+) |
| Description | Similar to TKI1: TSL-kinase interacting protein 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_003717 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g25540 |
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. |
Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit.2007 · DOI: 10.1016/j.molcel.2007.05.007 Acceleration of flowering during shade avoidance in Arabidopsis alters the balance between FLOWERING LOCUS C-mediated repression and photoperiodic induction of flowering.2008 · DOI: 10.1104/pp.108.125468 The mediator complex subunit PFT1 is a key regulator of jasmonate-dependent defense in Arabidopsis.2009 · DOI: 10.1105/tpc.109.066910
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.571; coverage=25.271; evalue=5.93e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006534 | cysteine metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006535 | L-cysteine biosynthetic process from L-serine | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007389 | pattern specification process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.571; coverage=25.271; evalue=5.93e-35; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=68.75; coverage=17.329; evalue=4.57e-14; UniProt GO evidence=IDA:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009836 | fruit ripening, climacteric | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=88.889; coverage=12.996; evalue=3.17e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019499 | cyanide metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.571; coverage=25.271; evalue=5.93e-35; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.571; coverage=25.271; evalue=5.93e-35; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003682 | chromatin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.571; coverage=25.271; evalue=5.93e-35; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004124 | cysteine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050017 | L-3-cyanoalanine synthase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G36960 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=88.571; coverage=25.271; evalue=5.93e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mdm:103401891 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=68.75; coverage=17.329; evalue=4.57e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mdm:103405317 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=88.889; coverage=12.996; evalue=3.17e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sot:102601315 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=70.213; coverage=16.968; evalue=4.23e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sot:102604154 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=72.34; coverage=16.968; evalue=3.42e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release |