基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA03G449900 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr03:112249525-112259082 (-) |
| 描述 | Similar to At3g47830: Putative DNA glycosylase At3g47830 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_009589 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 22 条 GO 注释和 6 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g47830 |
推定 DNA 糖苷酶 At3g47830。 | 暂无已核实直接文献 |
At1g10480 |
可能的转录因子,赤霉素(GA)诱导的花序表皮毛起始形成所必需。 |
Zinc finger protein5 is required for the control of trichome initiation by acting upstream of zinc finger protein8 in Arabidopsis.2011 · DOI: 10.1104/pp.111.180281
|
At1g67030 |
花序毛状体响应赤霉素和细胞分裂素启动所需的可能转录因子。 | |
At1g68360 |
花序毛状体响应赤霉素和细胞分裂素启动所需的可能转录因子。 | |
At5g06650 |
花序毛状体响应赤霉素和细胞分裂素启动所需的可能转录因子。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0006281 | DNA repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.058; 覆盖度=27.074; E 值=7.52e-14; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006284 | base-excision repair | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.459; 覆盖度=40.532; E 值=1.65e-106; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006285 | base-excision repair, AP site formation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.058; 覆盖度=27.074; E 值=7.52e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0040029 | epigenetic regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.058; 覆盖度=27.074; E 值=7.52e-14; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141166 | chromosomal 5-methylcytosine DNA demethylation pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141169 | chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.636; 覆盖度=27.074; E 值=1.66e-13; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.058; 覆盖度=27.074; E 值=7.52e-14; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.459; 覆盖度=40.532; E 值=1.65e-106; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.058; 覆盖度=27.074; E 值=7.52e-14; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016798 | hydrolase activity, acting on glycosyl bonds | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.459; 覆盖度=40.532; E 值=1.65e-106; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016829 | lyase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.636; 覆盖度=27.074; E 值=1.66e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019104 | DNA N-glycosylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16; UniProt GO evidence=IEA:TreeGrafter | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035514 | DNA demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051539 | 4 iron, 4 sulfur cluster binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051747 | cytosine C-5 DNA demethylase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140078 | class I DNA-(apurinic or apyrimidinic site) endonuclease activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140097 | catalytic activity, acting on DNA | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.459; 覆盖度=40.532; E 值=1.65e-106; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G36490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=30.058; 覆盖度=27.074; E 值=7.52e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G47830 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=59.459; 覆盖度=40.532; E 值=1.65e-106 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0217900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os05g0445900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=30.636; 覆盖度=27.074; E 值=1.66e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:9271145 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=26.054; 覆盖度=40.845; E 值=3.15e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sai:Saci_1497 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=30.928; 覆盖度=30.36; E 值=6.64e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release |