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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G413650
Query referenceTK1151
LocationChr03:102868261-102873246 (-)
DescriptionSimilar to CLPD: Chaperone protein ClpD%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009257 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 13 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g51070 Molecular chaperone that interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast.
Insights into the Clp/HSP100 chaperone system from chloroplasts of Arabidopsis thaliana.2011 · DOI: 10.1074/jbc.m110.211946
Chloroplastic Hsp100 chaperones ClpC2 and ClpD interact in vitro with a transit peptide only when it is located at the N-terminus of a protein.2012 · DOI: 10.1186/1471-2229-12-57
Characterization of the accessory protein ClpT1 from Arabidopsis thaliana: oligomerization status and interaction with Hsp100 chaperones.2014 · DOI: 10.1186/s12870-014-0228-0

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0405000 Molecular chaperone that may interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. No verified direct reference in this release
Os02g0526400 Molecular chaperone that may function in heat stress response.
Genome-wide analysis of rice ClpB/HSP100, ClpC and ClpD genes.2010 · DOI: 10.1186/1471-2164-11-95
Constitutive over-expression of rice ClpD1 protein enhances tolerance to salt and desiccation stresses in transgenic Arabidopsis plants.2016 · DOI: 10.1016/j.plantsci.2016.06.004
Os12g0230100 Molecular chaperone that may interact with a ClpP-like protease involved in degradation of denatured proteins in the chloroplast. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0034605cellular response to heatBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.738; coverage=92.267; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045037protein import into chloroplast stromaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.264; coverage=91.525; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0065003protein-containing complex assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901002positive regulation of response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.738; coverage=92.267; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1902584positive regulation of response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.738; coverage=92.267; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stromaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032991protein-containing complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.2; coverage=91.208; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0044183protein folding chaperoneMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G51070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.354; coverage=95.763; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os02g0526400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.738; coverage=92.267; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0405000KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=66.135; coverage=92.903; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release