基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA03G395510 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr03:98293601-98293906 (-) |
| 描述 | Similar to EREBP1: Ethylene-responsive transcription factor 1 (Oryza sativa subsp. japonica OX%3D39947) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_037965 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 17 条 GO 注释和 3 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At3g14230 |
参与类胡萝卜素生物合成调节的转录因子。 | |
At1g53910 |
参与低氧基因表达激活及乙烯反应的转录因子。 | 暂无已核实直接文献 |
At1g72360 |
参与缺氧应激反应的转录激活因子。 |
HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana.2010 · DOI: 10.1111/j.1365-313x.2010.04149.x The AP2/ERF transcription factor AtERF73/HRE1 modulates ethylene responses during hypoxia in Arabidopsis.2011 · DOI: 10.1104/pp.111.172486 The hypoxia responsive transcription factor genes ERF71/HRE2 and ERF73/HRE1 of Arabidopsis are differentially regulated by ethylene.2011 · DOI: 10.1111/j.1399-3054.2011.01486.x
|
At3g16770 |
可能充当转录激活因子。 | 暂无已核实直接文献 |
水稻
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0001666 | response to hypoxia | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.259; 覆盖度=64.706; E 值=8.4e-37; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.122; 覆盖度=55.43; E 值=2.9e-47; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.122; 覆盖度=55.43; E 值=2.9e-47; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009873 | ethylene-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.122; 覆盖度=55.43; E 值=2.9e-47; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.259; 覆盖度=64.706; E 值=8.4e-37; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046148 | pigment biosynthetic process | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.052; 覆盖度=34.842; E 值=6.6e-38; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070483 | detection of hypoxia | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=43.866; 覆盖度=60.86; E 值=1.21e-36; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000280 | regulation of root development | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=43.866; 覆盖度=60.86; E 值=1.21e-36; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.122; 覆盖度=55.43; E 值=2.9e-47; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=43.866; 覆盖度=60.86; E 值=1.21e-36; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009543 | chloroplast thylakoid lumen | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.052; 覆盖度=34.842; E 值=6.6e-38; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.259; 覆盖度=64.706; E 值=8.4e-37; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.122; 覆盖度=55.43; E 值=2.9e-47; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=46.122; 覆盖度=55.43; E 值=2.9e-47; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004097 | catechol oxidase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.052; 覆盖度=34.842; E 值=6.6e-38; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=48.701; 覆盖度=34.842; E 值=9.76e-38; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.052; 覆盖度=34.842; E 值=6.6e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G53910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=43.866; 覆盖度=60.86; E 值=1.21e-36 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G14230 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.259; 覆盖度=64.706; E 值=8.4e-37 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mdm:103446446 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=48.052; 覆盖度=34.842; E 值=6.6e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release |