Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G325630 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:79986030-79988830 (-) |
| Description | Similar to At5g27450: Mevalonate kinase (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_007509 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 23 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g27450 |
Catalyzes the phosphorylation of mevalonate to mevalonate 5-phosphate, a key step in isoprenoid and cholesterol biosynthesis. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006695 | cholesterol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006720 | isoprenoid metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61; UniProt GO evidence=TAS:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008299 | isoprenoid biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010142 | farnesyl diphosphate biosynthetic process, mevalonate pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016125 | sterol metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61; UniProt GO evidence=TAS:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016126 | sterol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016310 | phosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.325; coverage=102.338; evalue=7.7e-65; UniProt GO evidence=IC:dictyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017148 | negative regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019287 | isopentenyl diphosphate biosynthetic process, mevalonate pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033386 | geranylgeranyl diphosphate biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033489 | cholesterol biosynthetic process via desmosterol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033490 | cholesterol biosynthetic process via lathosterol | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036197 | zymosterol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045540 | regulation of cholesterol biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61; UniProt GO evidence=NAS:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004496 | mevalonate kinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990825 | sequence-specific mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G27450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.185; coverage=99.481; evalue=7.79e-172 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:505792 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.795; coverage=98.961; evalue=5.91e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0272018 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.325; coverage=102.338; evalue=7.7e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4598 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.903; coverage=99.481; evalue=1.6e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:81727 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.105; coverage=98.701; evalue=1.88e-61 | UniProtKB/Swiss-Prot DAT 2026 current_release |