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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G286260
Query referenceTK1151
LocationChr03:70668745-70671393 (-)
DescriptionSimilar to RANGAP1: RAN GTPase-activating protein 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_018823 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 41 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g19320 GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state. No verified direct reference in this release
At3g63130 GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state.
Plant RanGAPs are localized at the nuclear envelope in interphase and associated with microtubules in mitotic cells.2002 · DOI: 10.1046/j.1365-313x.2002.01324.x
RanGAP1 is a continuous marker of the Arabidopsis cell division plane.2008 · DOI: 10.1073/pnas.0806157105
At1g47200 Regulates the mitotic activity in roots.
Arabidopsis WPP-domain proteins are developmentally associated with the nuclear envelope and promote cell division.2004 · DOI: 10.1105/tpc.104.026740
WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1.2009 · DOI: 10.1104/pp.109.143404
At5g43070 Regulates the mitotic activity in roots.
Arabidopsis WPP-domain proteins are developmentally associated with the nuclear envelope and promote cell division.2004 · DOI: 10.1105/tpc.104.026740
WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1.2009 · DOI: 10.1104/pp.109.143404

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000911cytokinesis by cell plate formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006606protein import into nucleusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006913nucleocytoplasmic transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.905; coverage=78.627; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.302; coverage=49.142; evalue=3.77e-18; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007249canonical NF-kappaB signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=ISS:HGNCUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031396regulation of protein ubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032496response to lipopolysaccharideBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032687negative regulation of interferon-alpha productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032688negative regulation of interferon-beta productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032691negative regulation of interleukin-1 beta productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:CACAOUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032695negative regulation of interleukin-12 productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:CACAOUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032715negative regulation of interleukin-6 productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032720negative regulation of tumor necrosis factor productionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:CACAOUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043124negative regulation of canonical NF-kappaB signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045824negative regulation of innate immune responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048147negative regulation of fibroblast proliferationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050680negative regulation of epithelial cell proliferationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051168nuclear exportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.302; coverage=49.142; evalue=3.77e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051898negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901223negative regulation of non-canonical NF-kappaB signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000325plant-type vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.905; coverage=78.627; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000776kinetochoreCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.302; coverage=49.142; evalue=3.77e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005635nuclear envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.302; coverage=49.142; evalue=3.77e-18; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.905; coverage=78.627; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005819spindleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009504cell plateCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009524phragmoplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.905; coverage=78.627; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031965nuclear membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032153cell division siteCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034451centriolar satelliteCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=ISO:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048471perinuclear region of cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.302; coverage=49.142; evalue=3.77e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005096GTPase activator activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031267small GTPase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.302; coverage=49.142; evalue=3.77e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0036312phosphatidylinositol 3-kinase regulatory subunit bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140678molecular function inhibitor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18; UniProt GO evidence=IDA:MGIUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G63130KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.554; coverage=78.315; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G19320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.905; coverage=78.627; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGmmu:268857KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.947; coverage=41.498; evalue=9.25e-18UniProtKB/Swiss-Prot DAT 2026 current_release