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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA03G007330
Query referenceTK1151
LocationChr03:1760866-1763397 (+)
DescriptionSimilar to MTERF5: Transcription termination factor MTERF5%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006055 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g14605 Transcription termination factor required for processing and steady-state levels of plastid transcripts.
Arabidopsis MDA1, a nuclear-encoded protein, functions in chloroplast development and abiotic stress responses.2012 · DOI: 10.1371/journal.pone.0042924
mTERF5 Acts as a Transcriptional Pausing Factor to Positively Regulate Transcription of Chloroplast psbEFLJ.2019 · DOI: 10.1016/j.molp.2019.05.007

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006353DNA-templated transcription terminationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008033tRNA processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009658chloroplast organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=40.307; evalue=3.49e-26; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042793plastid transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071452cellular response to singlet oxygenBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=40.307; evalue=3.49e-26; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.137; coverage=53.359; evalue=2.02e-26; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042651thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003676nucleic acid bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.137; coverage=53.359; evalue=2.02e-26; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003690double-stranded DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003727single-stranded RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990837sequence-specific double-stranded DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G03050KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=33.333; coverage=40.307; evalue=3.49e-26UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G21710KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=29.137; coverage=53.359; evalue=2.02e-26UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G14605KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=53.895; coverage=91.171; evalue=4.63e-166UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G38160KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=29.137; coverage=53.359; evalue=9.61e-31UniProtKB/Swiss-Prot DAT 2026 current_release