Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G002460 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:607554-608700 (-) |
| Description | Similar to NAC083: NAC domain-containing protein 83 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_006032 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 19 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g13180 |
Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. |
VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis.2010 · DOI: 10.1105/tpc.108.064048
|
At2g33480 |
Transcription activator of the mannan synthase CSLA9. | No verified direct reference in this release |
At3g04060 |
Transcriptional activator that acts as a positive regulator of leaf senescence. | No verified direct reference in this release |
At3g15510 |
Transcription factor of the NAC family (Probable). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006355 | regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.806; coverage=82.745; evalue=4.47e-17; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009651 | response to salt stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009791 | post-embryonic development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.806; coverage=82.745; evalue=4.47e-17; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010089 | xylem development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010150 | leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010629 | negative regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045892 | negative regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048608 | reproductive structure development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.806; coverage=82.745; evalue=4.47e-17; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048731 | system development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.144; coverage=81.961; evalue=1.47e-15; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900055 | regulation of leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1900057 | positive regulation of leaf senescence | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.802; coverage=63.529; evalue=5.78e-16; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903648 | positive regulation of chlorophyll catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.802; coverage=63.529; evalue=5.78e-16; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.447; coverage=62.353; evalue=2.64e-17; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005509 | calcium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.802; coverage=63.529; evalue=5.78e-16; UniProt GO evidence=EXP:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G33480 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.447; coverage=62.353; evalue=2.64e-17 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G04060 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.802; coverage=63.529; evalue=5.78e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G13180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=35.256; coverage=61.176; evalue=3.56e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release |