基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G571550 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:147582945-147585235 (+) |
| 描述 | Similar to GGB: Geranylgeranyl transferase type-1 subunit beta (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_030711 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 15 条 GO 注释和 5 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At2g39550 |
催化从二甲基戊二烯焦磷酸(geranyl-geranyl pyrophosphate)向蛋白质C端倒数第四位的半胱氨酸转移一个二甲基戊二烯基团,适用于C端序列为Cys-脂肪族-脂肪族-X(CaaX)的蛋白质。 | 暂无已核实直接文献 |
At5g40280 |
将法尼基从法尼基二磷酸转移至多种蛋白质C端倒数第4位的半胱氨酸;这些蛋白的C端具有Cys-脂肪族氨基酸-脂肪族氨基酸-X(CaaX)序列。 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0008284 | positive regulation of cell population proliferation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.173; 覆盖度=94.089; E 值=2.34e-40; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018344 | protein geranylgeranylation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045787 | positive regulation of cell cycle | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.173; 覆盖度=94.089; E 值=2.34e-40; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080120 | CAAX-box protein maturation | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.173; 覆盖度=94.089; E 值=2.34e-40; UniProt GO evidence=ISO:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005953 | CAAX-protein geranylgeranyltransferase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004661 | protein geranylgeranyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.173; 覆盖度=94.089; E 值=1e-40; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004662 | CAAX-protein geranylgeranyltransferase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.173; 覆盖度=94.089; E 值=1e-40; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901363 | heterocyclic compound binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.173; 覆盖度=94.089; E 值=2.34e-40; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G39550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=71.503; 覆盖度=95.074; E 值=6.06e-92 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:509322 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=37.173; 覆盖度=94.089; E 值=1e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5229 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.173; 覆盖度=94.089; E 值=2.39e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:225467 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=5; 一致性=37.173; 覆盖度=94.089; E 值=2.47e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:81746 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=37.173; 覆盖度=94.089; E 值=2.34e-40 | UniProtKB/Swiss-Prot DAT 2026 current_release |