Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G530750 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:136849924-136855561 (-) |
| Description | Similar to PNP1: Probable polyribonucleotide nucleotidyltransferase 1%2C chloroplastic (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_012915 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 23 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g03710 |
Involved in the metabolism of all major classes of plastid RNAs. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0168000 |
Involved in the metabolism of all major classes of plastid RNAs. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000958 | mitochondrial mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000965 | mitochondrial RNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.467; coverage=82.946; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006401 | RNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006402 | mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.467; coverage=82.946; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008033 | tRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010323 | negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015995 | chlorophyll biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016036 | cellular response to phosphate starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016120 | carotene biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016123 | xanthophyll biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031425 | chloroplast RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000175 | 3'-5'-RNA exonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.467; coverage=82.946; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004654 | polyribonucleotide nucleotidyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G03710 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.627; coverage=96.013; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cab:CAB730 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.374; coverage=81.728; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cca:CCA_00762 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=47.967; coverage=81.728; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0168000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.419; coverage=85.714; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |