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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA02G439190
Query referenceTK1151
LocationChr02:111587127-111587609 (-)
DescriptionSimilar to BRH1: Brassinosteroid-responsive RING protein 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_022621 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 20 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g61460 May be involved in the brassinosteroids (BRs) signaling pathway and regulate the growth and development of rosette leaves.
Characterisation of BRH1, a brassinosteroid-responsive RING-H2 gene from Arabidopsis thaliana.2002 · DOI: 10.1007/s00425-001-0723-z
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.2018 · DOI: 10.1007/s11427-017-9133-8
At2g47560 RING-H2 finger protein ATL64. No verified direct reference in this release
At2g46495 Putative RING-H2 finger protein ATL21A. No verified direct reference in this release
At2g04240 Function on abscisic acid homeostasis at post-translational level, probably through ubiquitin/proteasome-dependent substrate- specific degradation.
Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis.2006 · DOI: 10.1111/j.1365-313x.2006.02782.x
Global analysis of della direct targets in early gibberellin signaling in Arabidopsis.2007 · DOI: 10.1105/tpc.107.054999
At3g62690 RING-H2 finger protein ATL5. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009738abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009741response to brassinosteroidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009742brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009789positive regulation of abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010200response to chitinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016567protein ubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0047484regulation of response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071456cellular response to hypoxiaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=HEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901371regulation of leaf morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1905421regulation of plant organ morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.372; coverage=28.383; evalue=3.48e-12; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031982vesicleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.655; coverage=45.875; evalue=1.99e-10; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004842ubiquitin-protein transferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061630ubiquitin protein ligase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G23980KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=43.478; coverage=22.772; evalue=3.15e-11UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G01150KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=42.857; coverage=18.482; evalue=9.93e-11UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G35420KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.372; coverage=28.383; evalue=3.48e-12UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G18930KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.655; coverage=45.875; evalue=1.99e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G61460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.714; coverage=46.205; evalue=3.39e-27UniProtKB/Swiss-Prot DAT 2026 current_release