Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G140830 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:36366804-36371811 (-) |
| Description | Similar to MRE11: Double-strand break repair protein MRE11 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016440 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 45 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g54260 |
Core component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: Q25AA3 |
Core component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. | No verified direct reference in this release |
Os04g0635900 |
Core component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000019 | regulation of mitotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000723 | telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000724 | double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000729 | DNA double-strand break processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006302 | double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006303 | double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006310 | DNA recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007004 | telomere maintenance via telomerase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007062 | sister chromatid cohesion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007095 | mitotic G2 DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007131 | reciprocal meiotic recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031573 | mitotic intra-S DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031860 | telomeric 3' overhang formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032206 | positive regulation of telomere maintenance | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035825 | homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042138 | meiotic DNA double-strand break formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044818 | mitotic G2/M transition checkpoint | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0062176 | R-loop processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097552 | mitochondrial double-strand break repair via homologous recombination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0110025 | DNA strand resection involved in replication fork processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000781 | positive regulation of double-strand break repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IMP:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2001033 | negative regulation of double-strand break repair via nonhomologous end joining | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000791 | euchromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000795 | synaptonemal complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005657 | replication fork | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030870 | Mre11 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035861 | site of double-strand break | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098687 | chromosomal region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000014 | single-stranded DNA endodeoxyribonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003690 | double-stranded DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004518 | nuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=TAS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004520 | DNA endonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008296 | 3'-5'-DNA exonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008408 | 3'-5' exonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030145 | manganese ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045296 | cadherin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133; UniProt GO evidence=HDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G54260 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.0; coverage=104.435; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0635900 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=65.659; coverage=104.149; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4361 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=44.309; coverage=70.386; evalue=1.54e-133 | UniProtKB/Swiss-Prot DAT 2026 current_release |