基因注释
展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。
查询结果
| 基因 ID | TkA02G130820 |
|---|---|
| 当前查询版本 | TK1151 |
| 位置 | Chr02:33847544-33852689 (-) |
| 描述 | Similar to SPA3: Protein SPA1-RELATED 3 (Arabidopsis thaliana OX%3D3702) |
| 注释来源组装 | GCA_047496595.1_OSU_TarKok_2.0 |
功能注释来源:OH1004 · LXL04_016519 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释;下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。
当前查询返回来自 OH1004 注释条目的 18 条 GO 注释和 4 条 KEGG 基因交叉引用;只下载当前查询结果,不据此推断 KEGG 通路成员。
拟南芥 / 水稻参考基因与文献
文献对应拟南芥或水稻参考基因;橡胶草的功能关联来自当前参考组装的蛋白序列比对。
拟南芥
| 参考基因 ID | 可能功能 | 对应论文 / DOI |
|---|---|---|
At1g53090 |
光形态发生的阻遏物。 |
The SPA1-like proteins SPA3 and SPA4 repress photomorphogenesis in the light.2003 · DOI: 10.1046/j.1365-313x.2003.01813.x
|
At3g15354 |
光形态发生的阻遏物。 |
The SPA1-like proteins SPA3 and SPA4 repress photomorphogenesis in the light.2003 · DOI: 10.1046/j.1365-313x.2003.01813.x
|
At4g11110 |
参与抑制黑暗生长的幼苗的光形态建成。 | |
UniProt: Q9SYX2 |
控制正常光周期开花并调节昼夜节律。 | 暂无已核实直接文献 |
水稻
当前来源表未检出该物种的同源命中。
GO / KEGG
以下 GO/KEGG 注释源自上述 OH1004 注释条目,保留原始同源转移证据及覆盖度;其来源物种范围与拟南芥/水稻直接比对表不同。
| 类型 | ID | 名称 | 命名空间 | 证据 | 来源 |
|---|---|---|---|---|---|
| GO | GO:0009585 | red, far-red light phototransduction | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.134; 覆盖度=99.498; E 值=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009640 | photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009658 | chloroplast organization | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010017 | red or far-red light signaling pathway | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010100 | negative regulation of photomorphogenesis | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010114 | response to red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010218 | response to far red light | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048575 | short-day photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000028 | regulation of photoperiodism, flowering | 生物过程 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.134; 覆盖度=99.498; E 值=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016604 | nuclear body | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | 细胞组分 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004672 | protein kinase activity | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042802 | identical protein binding | 分子功能 | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0; UniProt GO evidence=IPI:IntAct | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G53090 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=58.134; 覆盖度=99.498; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G46340 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=41.763; 覆盖度=86.826; E 值=1.27e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G15354 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=55.69; 覆盖度=103.639; E 值=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G11110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=41.58; 覆盖度=84.191; E 值=3.58e-165 | UniProtKB/Swiss-Prot DAT 2026 current_release |