RubberDandelionOmics 橡胶草多组学网站
更多
转录组数据查询 注释 橡胶合成 转录因子预测 靶基因 蛋白关联网络 重测序 工具 下载
ZH EN

本页使用教程

基因注释

展示当前基因的功能描述、GO/KEGG 注释及分物种同源证据。命中结果按查询版本、序列来源和比对证据分层显示。

示例 TkA01G624900 LXL04_000258 文献示例 LXL04_039733 TkAUNG001940

查询结果

下载当前结果

基因 IDTkA01G589380
当前查询版本TK1151
位置Chr01:148266857-148268974 (+)
描述Similar to At3g25440: Uncharacterized CRM domain-containing protein At3g25440%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
注释来源组装GCA_047496595.1_OSU_TarKok_2.0

功能注释来源：OH1004 · LXL04_000772 · GCA_047496595.1_OSU_TarKok_2.0。此处为经 ID 对照查得的 OH1004 注释；下方拟南芥/水稻同源表使用当前查询参考的独立蛋白比对。

当前查询返回来自 OH1004 注释条目的 13 条 GO 注释和 5 条 KEGG 基因交叉引用；只下载当前查询结果，不据此推断 KEGG 通路成员。

拟南芥 / 水稻参考基因与文献

文献对应拟南芥或水稻参考基因；橡胶草的功能关联来自当前参考组装的蛋白序列比对。

下载当前基因文献

拟南芥

参考基因 ID可能功能对应论文 / DOI
At3g25440 未表征的含CRM结构域蛋白At3g25440，叶绿体定位。 暂无已核实直接文献
At3g27550 参与线粒体Ⅱ组内含子的剪接。
CFM9, a Mitochondrial CRM Protein, Is Crucial for Mitochondrial Intron Splicing, Mitochondria Function and Arabidopsis Growth and Stress Responses.2019 · DOI: 10.1093/pcp/pcz147
At3g23070 结合叶绿体中的特定 II 组内含子并促进其剪接。 暂无已核实直接文献

水稻

参考基因 ID可能功能对应论文 / DOI
Os11g0592400 结合叶绿体中的特定 II 组内含子并促进其剪接。
Two CRM protein subfamilies cooperate in the splicing of group IIB introns in chloroplasts.2008 · DOI: 10.1261/rna.1223708

GO / KEGG

以下 GO/KEGG 注释源自上述 OH1004 注释条目，保留原始同源转移证据及覆盖度；其来源物种范围与拟南芥/水稻直接比对表不同。

类型ID名称命名空间证据来源
GOGO:0000373Group II intron splicing生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006397mRNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009414response to water deprivation生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stress生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acid生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048316seed development生物过程Swiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.158; 覆盖度=41.124; E 值=4.41e-25; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140040mitochondrial polycistronic RNA processing生物过程Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrion细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplast细胞组分Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.208; 覆盖度=98.202; E 值=4.49e-152; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009570chloroplast stroma细胞组分Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.517; 覆盖度=40.0; E 值=5.11e-26; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990904ribonucleoprotein complex细胞组分Swiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.208; 覆盖度=98.202; E 值=4.49e-152; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003729mRNA binding分子功能Swiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.517; 覆盖度=40.0; E 值=5.11e-26; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G23070KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=4; 一致性=37.158; 覆盖度=41.124; E 值=4.41e-25UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G25440KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=1; 一致性=57.208; 覆盖度=98.202; E 值=4.49e-152UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G27550KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=2; 一致性=45.763; 覆盖度=39.775; E 值=8.7e-34UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os11g0592400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=5; 一致性=35.196; 覆盖度=40.225; E 值=6.56e-24UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGzma:100126360KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed 同源转移; 命中排序=3; 一致性=36.517; 覆盖度=40.0; E 值=5.11e-26UniProtKB/Swiss-Prot DAT 2026 current_release